Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271982g00007 ATGGACAGAACAGTTCCTTCAAGGTTGATTGATAATGTTGCTGCTACAAGAATCCAAAATGCATTTCGTTCTTTCATGGCAAGAAGAACATTAAACCATCTAAGGGGGGAAGAGAAGTTTGAAGCTCTGATTCAGGATCCCAGAGAGCAAACAGCAACTGCATTAAGCTATATACATTCATGGAGCAGAATACAAGACCAGATTAGAGCTCGCAGAATCTGCATGATCACAGAAGCTCGTATTAAGCAAAGGAGATTGGAAAGCCAGCTAAAACTCGAAGCTAAGATTCATGAGCTCGAGGTGGAGTGGTGCAGTGGTTCTGAAACAATGGAAGAGATAATTTCAAGGCTATATCAGAGAGAAGAGGCAGCAATTAAACGAGAGCGAGCCATGGCATATGCCTTCTCTCATCAGTGGAGGCCAAATTGTAGCCAATACTTCGGTCAGGCTTCGTATAGCCTCGGTAAGGAAAGCTGGGGCTGGAGCTGGACGGAGCGCTGGGTCGCGGCACGCCCATGGGAAATCCGGGTCCGAGTTCACACCTCCAAGCTAAAGAAACTGAATAGCCTGCAGCAAAAGTCCAAGTTAGACAAGATGGACGACAACAAGAGCACAGTATCAGCAGCTAATCCCGCCCTGTCGAACGGGAAAGGAAAAGAAAACGACATTTCAGAGCTGTCAAAGAACTGTATACCTGAATAG 702 0.4615 MDRTVPSRLIDNVAATRIQNAFRSFMARRTLNHLRGEEKFEALIQDPREQTATALSYIHSWSRIQDQIRARRICMITEARIKQRRLESQLKLEAKIHELEVEWCSGSETMEEIISRLYQREEAAIKRERAMAYAFSHQWRPNCSQYFGQASYSLGKESWGWSWTERWVAARPWEIRVRVHTSKLKKLNSLQQKSKLDKMDDNKSTVSAANPALSNGKGKENDISELSKNCIPE 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271982g00007 233 ProSiteProfiles IQ motif profile. 11 39 IPR000048 GO:0005515
Stsc271982g00007 233 PANTHER IQ-DOMAIN 5-RELATED 12 202 - -
Stsc271982g00007 233 MobiDBLite consensus disorder prediction 191 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271982g00007 Stsc-Chr271982 31180 33288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271982g00007 7 211 IQD Protein Family AT3G15050 56.522 7.18e-80 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271982g00007 - - adu:107459847 406.371