Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271974g00020 ATGGCTGACTTATTAGAATGGCCGAAGCAAGATAAGCGCCGCTTGCTTCATGTTGTTTACCGTGTTGGTGATCTTGATCGCACCATCAAGTTTTATACTGAATGTTTTGGAATGAAACTTTTGAGGCAAAGGGATGTTCCTGAGGAGAAATACGCCAATGCTTTTCTCGGATTTGGCCCTGAACAATCTCACTTTGTTGTGGAGTTAACATATAATTATGGAGTGAGTTCATATGACATTGGAGATGGTTTTGGACATTTTGCTATAGCAACCCAAGATGTATACAAATTGGCTGAACACATCCTGTCCAAGGGTGGAAACATCACAAGGGACCCTGGTCCAATTCAGGGAGGGACCACCATCGTCGCCTTCGTTAAAGATCCTGACGGTTACACTTTTGCCCTCATCCAGAGACCTACCATCCATGACCCTTTTTGCCAAATAATGCTCCGTGTTGGTGACTTGGAGCGCTCAATTCAGTTTTATGAAAAGGCTGTGGGCCTTAAGTTATTGAGGAAGGTTGACAAGCCTGAGAACAAGTACACTGCAGCACTTCTTGGGTATGCAGAGGAGCATGAAACAACTGTGTTGGAGTTGACATACAACTATGGTGTCACTGAATACTCTAAGGGAAATGCTTATGCACAAATTGCTATTGGTACTGATGACGTGTACAAGAGCGCCGAAGTTGTTAGTGCCGTTGCACAAGAGCTCGGAGGCAAGATTACTCGGCCACCGGGTCCACTTCCCGGCCTTAACACCAAAATTACTTCTTTCTTGGATCCTGATGGATGGAAAACTGTCTTGGTTGACAATGAAGATTTCCTGAAGGAACTGAACTGA 843 0.446 MADLLEWPKQDKRRLLHVVYRVGDLDRTIKFYTECFGMKLLRQRDVPEEKYANAFLGFGPEQSHFVVELTYNYGVSSYDIGDGFGHFAIATQDVYKLAEHILSKGGNITRDPGPIQGGTTIVAFVKDPDGYTFALIQRPTIHDPFCQIMLRVGDLERSIQFYEKAVGLKLLRKVDKPENKYTAALLGYAEEHETTVLELTYNYGVTEYSKGNAYAQIAIGTDDVYKSAEVVSAVAQELGGKITRPPGPLPGLNTKITSFLDPDGWKTVLVDNEDFLKELN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271974g00020 280 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 148 266 IPR004360 -
Stsc271974g00020 280 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 134 IPR004360 -
Stsc271974g00020 280 CDD GlxI_Ni 15 136 - -
Stsc271974g00020 280 PANTHER LACTOYLGLUTATHIONE LYASE 3 279 - -
Stsc271974g00020 280 FunFam Lactoylglutathione lyase 141 280 - -
Stsc271974g00020 280 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 14 138 IPR037523 -
Stsc271974g00020 280 ProSitePatterns Glyoxalase I signature 1. 17 38 IPR018146 GO:0004462|GO:0046872
Stsc271974g00020 280 Gene3D - 141 280 IPR029068 -
Stsc271974g00020 280 NCBIfam lactoylglutathione lyase 14 138 IPR004361 GO:0004462|GO:0046872
Stsc271974g00020 280 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 145 271 IPR029068 -
Stsc271974g00020 280 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 144 272 IPR037523 -
Stsc271974g00020 280 Gene3D - 1 138 IPR029068 -
Stsc271974g00020 280 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 13 144 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271974g00020 Stsc-Chr271974 71077 72798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271974g00020 147 271 Calmodulin-binding Proteins AT1G08110 28.667 1.44e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271974g00020 K01759 - gmx:100793089 518.85