Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271970g00020 ATGCACTCCACCATTCAAATCACCTTCTTCTTCTTCTTCTTCTTGATCTCAACTTCATTACTTTCAATTCTCTCCGCTGAGAACGTCACCTTCGAATTCTCTTCTTTCACACTCAGAAACATAACCCTAGCCGGAGATTCCTACCTCAGGAACGGCCTCGTCGGACTCACACGCGCCACCGACGTCCCCACCACCTCCTCCGGCGCCCTCCTCTACCACCTCCCCATCCCTCTCTTCGACAAATCCACCAACACCACCTCCTCCTTCTCCACTTCCTTCTCCTTCTCCATCACCAACCTCAACCCTTCCTCCTTCGGCGACGGCATCGCCTTCTTCCTCTCCCCTTCCAACGCCACCGCCGCCGTCTCCTCCGCCGGCCGCCTCGGTCTCCCTACCTCCACGCGCTTCCTCGCCGTCGAATTCGACACGCGCGATGACTCCGCTTTCCACGACCCTAACGAGAATCACGTCGGCTTCAACTTCAACTCTCTGAACTCCATAGCCACCGTTGACCCGATCAGCCACGGCATTGACCTCAAATCCGGCAATAGCATCACGTCTTGGATCGATTACAGCACGGAAAGAGAAACCCTAACGGTTTTCTTGAGCTACTCTCCTTCTTCGAAACCCTTGAGCCCTGTTCTCGCGGTGCACAACGTTGATCTCTCGAAGCTCTTGAAAGAAGAGAGGGTTTACGTTGGATTCTCAGGATCCACCACTGGAAGCACCGAGGTTCACTTGATCGAGCGATGGAGCTTCAGGAGCTTCGGTTTCGTCCCTAAGAGACAGAACTTGAACCCTCACAATGTTTCTGATAACACCGTTGGAGTTATGGGGAATGGAGCCACTGTTAATTTTCCACCTGCTACAACAGATTCTTCTTCTAATGATGATGATGATGATGGAAATGGAGATAGAAAGAACAAGATCAAGAGGAGGGAAATTGGTATTGCTGTTGCGGTTTCGGGTCCTGCGTTCTTCTTTGTTCTGTTCACGATCTTGCTGTTTTTCGCAGTTCGAAAATGTAAGGGTTTGAAGAGAGGTGGTAACAGCAAGAATTACAGCAGCAATGGTGTGAAGAGTTTTAAGGCTGAATCGTTTATTTCGTGTCCGAGGCAATTTGATTACAAGGATCTGAAGAATGCAACCAGGGAGTTTCATCCCAGCAGAATCATTGGTCATGGATCTTTTGGGACTGTGTACAAAGCTTTCTTTGTGTCTTCTGGCACCATTGCTGCTGTTAAGAGATCAAGGCATTCCCATGAAGGGAAAACTGAGTTCCTTGCTGAGTTGTCAATCATTGCTGGTTTGAGGCACAAGAACTTGGTTCAGCTCCAAGGTTGGTGTGTTGAGAAAGGTGAGTTGCTTCTTGTGTATGATTTCATGCCTAATGGGAGCTTGGACAAGATGCTATACAAGGAACCTGAGAGGGGAAGGTTGTTGAATTGGTCTCATAGGGTGAACATTGCTGTTGGTTTGGCTTCTGTTCTTGTTTACCTTCACCAAGAATGTGAACAAAGGGTGATTCATAGGGATATCAAAACTGGCAACGTTTTGCTTGATGGGAATTTCAATCCAAGGTTGGGTGATTTTGGTTTGGCAAAGCTTATGGATCATGATAAGAGCCCTGTTTCTACTTTGACTGCTGGAACAATGGGGTACCTTGCACCTGAGTATCTTCAATATGGTAAAGCTCTATGA 1701 0.4815 MHSTIQITFFFFFFLISTSLLSILSAENVTFEFSSFTLRNITLAGDSYLRNGLVGLTRATDVPTTSSGALLYHLPIPLFDKSTNTTSSFSTSFSFSITNLNPSSFGDGIAFFLSPSNATAAVSSAGRLGLPTSTRFLAVEFDTRDDSAFHDPNENHVGFNFNSLNSIATVDPISHGIDLKSGNSITSWIDYSTERETLTVFLSYSPSSKPLSPVLAVHNVDLSKLLKEERVYVGFSGSTTGSTEVHLIERWSFRSFGFVPKRQNLNPHNVSDNTVGVMGNGATVNFPPATTDSSSNDDDDDGNGDRKNKIKRREIGIAVAVSGPAFFFVLFTILLFFAVRKCKGLKRGGNSKNYSSNGVKSFKAESFISCPRQFDYKDLKNATREFHPSRIIGHGSFGTVYKAFFVSSGTIAAVKRSRHSHEGKTEFLAELSIIAGLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDKMLYKEPERGRLLNWSHRVNIAVGLASVLVYLHQECEQRVIHRDIKTGNVLLDGNFNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKAL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271970g00020 566 CDD lectin_legume_LecRK_Arcelin_ConA 31 257 IPR001220 GO:0030246
Stsc271970g00020 566 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 261 IPR013320 -
Stsc271970g00020 566 MobiDBLite consensus disorder prediction 281 307 - -
Stsc271970g00020 566 ProSitePatterns Protein kinases ATP-binding region signature. 392 415 IPR017441 GO:0005524
Stsc271970g00020 566 Pfam Legume lectin domain 29 260 IPR001220 GO:0030246
Stsc271970g00020 566 Gene3D - 26 283 - -
Stsc271970g00020 566 FunFam Os07g0541700 protein 462 552 - -
Stsc271970g00020 566 Pfam Protein kinase domain 387 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc271970g00020 566 PANTHER - 44 560 - -
Stsc271970g00020 566 SMART serkin_6 386 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc271970g00020 566 ProSiteProfiles Protein kinase domain profile. 386 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc271970g00020 566 Gene3D Transferase(Phosphotransferase) domain 1 462 565 - -
Stsc271970g00020 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Stsc271970g00020 566 SUPERFAMILY Protein kinase-like (PK-like) 361 563 IPR011009 -
Stsc271970g00020 566 Gene3D Phosphorylase Kinase; domain 1 348 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271970g00020 Stsc-Chr271970 87538 89333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271970g00020 7 565 Receptor kinase-like Gene Family AT5G55830 55.749 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Stsc271970g00020 Lectin_legB 1.8e-58 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271970g00020 - - adu:107496163 951.814