Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc271969g00017 | ATGTCAGTGGATAAACCAAACGATGTTATAGTATCACCCAAGGGAACCTTCTCTGCTGGCTTCTACGCTGTTGGCAAAAACGCTTACTGCTTTGGCATTTGGTTTTCCAAGAATCCTACTCTTGTATGGATGGCAAATCGTGACTATCCAGTCAACGGAAAACACTCAAAGCTTTCCTTACTCTCAAATGGTAACCTTGTTCTACTGGATGCCGACAACTCCCACGTTTGGTCAACAGACACATTTTCACCGCCGTCTTCCGCCGTGCATTTGGTTCTGTATGACACCGGAAACCTTGTTTTAATGGAGGACGGTGACAGAGACAACAGAAGCAGCTCCGTGTTGTGGCAAAGCTTTGATTTCCCAACGGATACGCTTCTTCCTGAGCAAGTGTTCACCCGATTCACCAAACTAATCTCGTCGAAAAGCGAGACAAACAAGTCCACCGGTTTGTACACGTTGTTCTTCGACAACGATAACGTTCTTCGTCTTCTTTACGATGGCCCTGAAGCTTCAGGGCTGTACTGGCCAGATCCATTAAAACTTGATTGGAACAATCACAGGAGTAGTTACAACAACAGCAGGGTTGCAGTGTTGGACACTTTGGGGATTTTCATTTCCTCTGATAATTTCACTTTCATGACTTCCGATTTCGGCTCCGCCGCCATCCAGCGAAGGATAACCCTTGATCCCAACGGAAACCTTGTTGTTTATAGCCGTATCAATGATCATGATCACTGGTATGTTTCGTGGCAAGCATTTTCAAGACCATGCCAGATCCATGGCGTTTGTGGGCCCAATAGTTTGTGCACTTTCCATACTAACTCTACCACCCGATGCTCTTGCCTTCCCGGCCATAAGATGAAGCAACCAAATGATTGGTCTTATGGCTGTGAACCCAGATTCTCTCAGTCTTGCCAGAACAACGAAAGCGCGTCACGGTTCATATCTTTAAGTAACACGGAGTTTTATGGGTATGATTATGGACTCATGATAAATTACACATTAGATCAGTGTAAGGATTTATGCCTCCAACTATGTGATTGCAGAGGTTTTCAGTATACTTATAACAAAGCCTCTGGTACCAACAAATGTTATATCAAGCTTCAATTAAGGAATGGAGATCGCGTAACATATTGCAATGCTGAATTTTATGTGAAGCTTCCAGCCAATAGTACATATTCTTTTCATGATGATCAAGTTTCAATCGTTAGTAAAAACAACAATCTTGATTGTCCTGTTGGGGAAGAAACAGTACAACTTGAAAGGAGTTATATCAAATGGCATGTAAGCAGGTATGTTAAGTTCTTGTTGTGGTTTGCAGGAGGAGTTGGGATATTTGAGATGCTGTGCATATTTGTGGTTTGGTACTTCATGGTAAGGTTTAGGATGCATTATTCTGGTGCAGATGAAGGGGTCTATGATTTGGTAGGGTTCAGGAGATTCAGTTACTCTGAGCTGAAACAAGCCACAAAAGGGTTTAGCCAAGAGATTGGAAAGGGTGCATGGGGGAGTGTATACAAAGGTGTACTCTCCGACGGGCGAGTGGCGGCGGTGAAGAGACTAATGGAAGCAAATCAAGGAGAAGAGGAGTTTCTTGCTGAAGTGAGCAGCATTGGAAGGCTCAATCACATGAACTTGATTAAGATGTGGGGATACTGTGCTGAAAGGAAACACAGGCTCCTTGTTTATGAGCACATGGAGCATGGTTCTCTTGCTGAGAATCTTAGGACAAATAGATTGGATTGGTCACAAAGGTTTGAGATTGCGTTGGGTACAGCCAAAGGTTTGTGTTATCTTCATGATGAGTGTTTGGATTGGATTTTGCATTGTGATGTAAAGCCACAGAATATTCTTCTGGATTCCAATTTTCAACCCAAGGTAGCTGATTTTGGATTGTCAAAGCTGCTAAATAGAAGTGACACTAATGATAAGTACTCTAGCTTTTCCAAGATAAGAGGAACCAGAGGATACATGGCTCCTGAGTGGGTTTTGAACCTCCCAATAACAACCAAGGTTGATGTTTATAGCTATGGAATTGTTGTGTTGGAAATGTTCACTGGAAAGAGCCCAACCAAGAACGTTTGGACTAGTAGTGATGGAGTAGAGAATAATAATCAACATATGTACCTGGTTGCATGGCTGAGAGAGAAACAGAATAAGGGATTTGGTAGTGGTTGGGTTAGTGAAATATTAGACCCCAGCATAGAAGGTGATTATGATGAAAATAAGTTGGAAGCTTTGGCTACAGTTGCTTTGCAATGTGTACAGGATGAGAGGGACAAAAGACCCACAATGAGCCAAGTGGTAGAAATGCTTCAGAAATATTTGTAA | 2334 | 0.4259 | MSVDKPNDVIVSPKGTFSAGFYAVGKNAYCFGIWFSKNPTLVWMANRDYPVNGKHSKLSLLSNGNLVLLDADNSHVWSTDTFSPPSSAVHLVLYDTGNLVLMEDGDRDNRSSSVLWQSFDFPTDTLLPEQVFTRFTKLISSKSETNKSTGLYTLFFDNDNVLRLLYDGPEASGLYWPDPLKLDWNNHRSSYNNSRVAVLDTLGIFISSDNFTFMTSDFGSAAIQRRITLDPNGNLVVYSRINDHDHWYVSWQAFSRPCQIHGVCGPNSLCTFHTNSTTRCSCLPGHKMKQPNDWSYGCEPRFSQSCQNNESASRFISLSNTEFYGYDYGLMINYTLDQCKDLCLQLCDCRGFQYTYNKASGTNKCYIKLQLRNGDRVTYCNAEFYVKLPANSTYSFHDDQVSIVSKNNNLDCPVGEETVQLERSYIKWHVSRYVKFLLWFAGGVGIFEMLCIFVVWYFMVRFRMHYSGADEGVYDLVGFRRFSYSELKQATKGFSQEIGKGAWGSVYKGVLSDGRVAAVKRLMEANQGEEEFLAEVSSIGRLNHMNLIKMWGYCAERKHRLLVYEHMEHGSLAENLRTNRLDWSQRFEIALGTAKGLCYLHDECLDWILHCDVKPQNILLDSNFQPKVADFGLSKLLNRSDTNDKYSSFSKIRGTRGYMAPEWVLNLPITTKVDVYSYGIVVLEMFTGKSPTKNVWTSSDGVENNNQHMYLVAWLREKQNKGFGSGWVSEILDPSIEGDYDENKLEALATVALQCVQDERDKRPTMSQVVEMLQKYL | 777 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc271969g00017 | 777 | PIRSF | SRK | 1 | 777 | IPR024171 | GO:0004674 | |
Stsc271969g00017 | 777 | Pfam | Protein kinase domain | 495 | 771 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc271969g00017 | 777 | ProSiteProfiles | Protein kinase domain profile. | 492 | 777 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc271969g00017 | 777 | SMART | blect_4 | 1 | 122 | IPR001480 | - | |
Stsc271969g00017 | 777 | CDD | B_lectin | 1 | 122 | IPR001480 | - | |
Stsc271969g00017 | 777 | Pfam | D-mannose binding lectin | 40 | 133 | IPR001480 | - | |
Stsc271969g00017 | 777 | ProSiteProfiles | Bulb-type lectin domain profile. | 1 | 114 | IPR001480 | - | |
Stsc271969g00017 | 777 | ProSitePatterns | Protein kinases ATP-binding region signature. | 498 | 520 | IPR017441 | GO:0005524 | |
Stsc271969g00017 | 777 | SUPERFAMILY | Protein kinase-like (PK-like) | 476 | 773 | IPR011009 | - | |
Stsc271969g00017 | 777 | FunFam | Putative receptor-like protein kinase | 567 | 777 | - | - | |
Stsc271969g00017 | 777 | ProSiteProfiles | PAN/Apple domain profile. | 306 | 389 | IPR003609 | - | |
Stsc271969g00017 | 777 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 608 | 620 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc271969g00017 | 777 | FunFam | S-receptor-like serine/threonine-protein kinase | 464 | 566 | - | - | |
Stsc271969g00017 | 777 | SMART | serkin_6 | 492 | 777 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc271969g00017 | 777 | Gene3D | Transferase(Phosphotransferase) domain 1 | 567 | 777 | - | - | |
Stsc271969g00017 | 777 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 31 | 177 | IPR036426 | - | |
Stsc271969g00017 | 777 | Pfam | S-locus glycoprotein domain | 214 | 289 | IPR000858 | GO:0048544 | |
Stsc271969g00017 | 777 | CDD | STKc_IRAK | 498 | 775 | - | - | |
Stsc271969g00017 | 777 | CDD | PAN_AP_plant | 302 | 389 | - | - | |
Stsc271969g00017 | 777 | Gene3D | Phosphorylase Kinase; domain 1 | 470 | 566 | - | - | |
Stsc271969g00017 | 777 | Gene3D | - | 3 | 120 | IPR036426 | - | |
Stsc271969g00017 | 777 | PANTHER | OS07G0415500 PROTEIN | 10 | 774 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc271969g00017 | Stsc-Chr271969 | 75112 | 77607 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc271969g00017 | 461 | 773 | Receptor kinase-like Gene Family | AT3G58690 | 41.590 | 9.95e-68 | 228 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Stsc271969g00017 | Pkinase | 5.1e-53 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc271969g00017 | - | - | gmx:100819308 | 1001.12 |