Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc271969g00011 | ATGGAGACTCGCGCCGCCGCAAAGAGAAGAGCCACCGCCCCCACCCAACTTGAGATTCAACACCTCAAGAAGCAGCGTGTTGTCTTGGCTGAACTCCCCAATACCCCCAACCTCATTCAATCCCCCACCATCAACGAGAAGAAACCCCATTCCAGAATTGATACAAAATCGCTCAAATTCCAGGATCCCAATCTTGTCGACGAGCCTTATGTTTCTGACATCCATAGCTATCTTCATTCAATGGAGATGGAGAAGAAGAGAAGGCCAATGGTAGATTACATTCAAAAAGTTCAGAAAGATGTTACCGCTAACATGAGAGGTGTATTGGTGGATTGGTTAGTAGAGGTTGCAGGAGAGTATAAGCTTCTCCCTGAGACTCTTTTTCTCGCCGTTTCTTACATTGATAGATTCCTCTCTACAAACCCTGTTGTTCGATCCAAGTTTCAGTTGCTCGGTGTTTCTTCCATGCTCATTGCATCGAAGTATGAAGAAATTAACCCTCCGGATGTGAAGGAATTCTGCTACATCACTGATGATACATACACGAAATCACAGGTTGTACAGATGGAAGCTGACATACTCAAATCCCTAAAGTTTGAAATGGGGAACCCTACTGTTAAGACCTTCCTATCTATGTATTCAGGGATGGCTTCTCAAGATAAAAAAATTAAAAATTCTCAGATTGAATTTTTGAGCTGCTATCTTGCTGAGCTAAGTCTATTGGACTATGGCTGTCTGAAATTCTTGCCTTCTATGATAGCTGCTTCGGTTATATTTCTTGCCAGATTTATTATCTGGCCTGTGGTGCATCCTTGGACTTCATCCTTGCGTGAATGCTCGGGTTATACATCGCTTGAACTTAAAGAATGTGTTCTGATCTTACATGACTTGTATCTGTCGAGAAGGGCAGCGTCTTTATCAGCTGTTCGGGAGAAATACAAGCAGCACAAGTTCAAATGTGTGGCAAATCTGTCTTCCTCACCAAGTATACCAAGTTCTTACTTTAAAGAAGAGTGA | 1017 | 0.4267 | METRAAAKRRATAPTQLEIQHLKKQRVVLAELPNTPNLIQSPTINEKKPHSRIDTKSLKFQDPNLVDEPYVSDIHSYLHSMEMEKKRRPMVDYIQKVQKDVTANMRGVLVDWLVEVAGEYKLLPETLFLAVSYIDRFLSTNPVVRSKFQLLGVSSMLIASKYEEINPPDVKEFCYITDDTYTKSQVVQMEADILKSLKFEMGNPTVKTFLSMYSGMASQDKKIKNSQIEFLSCYLAELSLLDYGCLKFLPSMIAASVIFLARFIIWPVVHPWTSSLRECSGYTSLELKECVLILHDLYLSRRAASLSAVREKYKQHKFKCVANLSSSPSIPSSYFKEE | 338 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc271969g00011 | 338 | ProSitePatterns | Cyclins signature. | 106 | 137 | IPR006671 | - | |
Stsc271969g00011 | 338 | SUPERFAMILY | Cyclin-like | 180 | 331 | IPR036915 | - | |
Stsc271969g00011 | 338 | SMART | cyclin_7 | 111 | 195 | IPR013763 | - | |
Stsc271969g00011 | 338 | SMART | cyclin_7 | 208 | 296 | IPR013763 | - | |
Stsc271969g00011 | 338 | CDD | CYCLIN_AtCycA-like_rpt2 | 204 | 318 | - | - | |
Stsc271969g00011 | 338 | Gene3D | - | 73 | 323 | - | - | |
Stsc271969g00011 | 338 | FunFam | Mitotic cyclin 6 | 89 | 189 | - | - | |
Stsc271969g00011 | 338 | Gene3D | - | 87 | 202 | - | - | |
Stsc271969g00011 | 338 | Pfam | Cyclin, N-terminal domain | 73 | 201 | IPR006671 | - | |
Stsc271969g00011 | 338 | PIRSF | Cyclin_A_B_D_E | 2 | 336 | IPR046965 | GO:0016538|GO:0044772 | |
Stsc271969g00011 | 338 | Pfam | Cyclin, C-terminal domain | 204 | 326 | IPR004367 | - | |
Stsc271969g00011 | 338 | PANTHER | CYCLINS | 52 | 321 | IPR039361 | - | |
Stsc271969g00011 | 338 | SUPERFAMILY | Cyclin-like | 67 | 201 | IPR036915 | - | |
Stsc271969g00011 | 338 | SMART | Cyclin_C_2 | 204 | 327 | IPR004367 | - | |
Stsc271969g00011 | 338 | FunFam | Cyclin A1 | 191 | 323 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc271969g00011 | Stsc-Chr271969 | 42048 | 43994 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc271969g00011 | 3 | 337 | Core Cell Cycle Gene Families | AT5G43080 | 55.620 | 7.19e-133 | 380 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc271969g00011 | K06627 | - | gmx:547779 | 428.713 |