Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc271969g00010 | ATGGAGACTCGTGCCGCCGCAAAGAGGAGGGCTATGGCTGCAAGCCTCACTGAGAATCAACCCCTCAAACGGAAGCGTGTTGTGTTAGGTGAACTTCCCAATTTCACTACGGAGAATTTGAGTGCCCAGAAACCCAAACCCAAACCCAAATCCAAATGCCTCAATGCTAAGCCCAAGAAAGCTTCTGTCAATGACAAGAATATCAATCCTGTTAAGGTTAAGGAGGAGAAGGAGAATGTGCTTGTTGATGAAGATGACGAGCTCACTAATGTTGACATTGTTGCCTCTGATATCTATATGTACCTTCGCAAGATGGAGCTGGAGAAGAATAGAAGGCCAAGAGTTGATTACCTTGAGAGGATTCAGAGAGATGTAACTGCGAACATGAGAGGGATTTTGGTGGATTGGTTGGTGGAAGTCGCAGAGGAATACAAGCTTCTCTCTGACACTCTCTATCTTTCGATTTCTTACATTGATAGATACCTCTCTATGAACCGTATCACCAAGCCAACCCTTCAGTTGCTGGGTGTTTCAGCAATGCTCATTGCTGCGAAATATGAAGAAATTAATCCCCCTCATGTGGAGGAGTTCTGCTTTATCACTGATAACACATACAACAAGTCAGAGGTAGTGGATATGGAAGCTGAAATCCTTAAGTCCTTGAATTTTGAAATGGGTAGCCCAACTATTAAGACCTTTTTAAGGAGGTTTAATGAGATTGCTTGTGAGGATCAAAAGGGTCAAAAATTGCAGTTTGAGTTTCTGTGTTATTACCTTGCTGAGCTAAGCTTGCTGGAGTATGCTTGTTTGAAGTTCTTGCCTTCTTTGATGGCTGCTGCTGTTATATTTCTTGCTAGATTTATCCTATCACCTAAATCAAATCCCTGGACTTTAACCCTTTATGACCGCACTGGATATGATTCACTTCAGTTGAAAGAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAGAAGGGGAGCATCCTTCCAAGCTATTAGGGAGAAATACAAGCAGCACAAGTTTAAGTATGTGGCAAATTTGCCTTCCCCTCCTCAGATACCAGATTTAAGCTTTGAAGATGAATTTTATGAAGAAAACTTTTATGATGATTGA | 1158 | 0.3929 | METRAAAKRRAMAASLTENQPLKRKRVVLGELPNFTTENLSAQKPKPKPKSKCLNAKPKKASVNDKNINPVKVKEEKENVLVDEDDELTNVDIVASDIYMYLRKMELEKNRRPRVDYLERIQRDVTANMRGILVDWLVEVAEEYKLLSDTLYLSISYIDRYLSMNRITKPTLQLLGVSAMLIAAKYEEINPPHVEEFCFITDNTYNKSEVVDMEAEILKSLNFEMGSPTIKTFLRRFNEIACEDQKGQKLQFEFLCYYLAELSLLEYACLKFLPSLMAAAVIFLARFILSPKSNPWTLTLYDRTGYDSLQLKEXXXXXXXXXXXXXXXXXXXXXXXXGRRGASFQAIREKYKQHKFKYVANLPSPPQIPDLSFEDEFYEENFYDD | 385 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc271969g00010 | 385 | FunFam | Cyclin superfamily protein, putative | 225 | 297 | - | - | |
Stsc271969g00010 | 385 | Pfam | Cyclin, N-terminal domain | 97 | 225 | IPR006671 | - | |
Stsc271969g00010 | 385 | SUPERFAMILY | Cyclin-like | 89 | 225 | IPR036915 | - | |
Stsc271969g00010 | 385 | FunFam | G2/mitotic-specific cyclin | 113 | 224 | - | - | |
Stsc271969g00010 | 385 | SMART | Cyclin_C_2 | 228 | 365 | IPR004367 | - | |
Stsc271969g00010 | 385 | Coils | Coil | 309 | 313 | - | - | |
Stsc271969g00010 | 385 | MobiDBLite | consensus disorder prediction | 35 | 59 | - | - | |
Stsc271969g00010 | 385 | ProSitePatterns | Cyclins signature. | 130 | 161 | IPR006671 | - | |
Stsc271969g00010 | 385 | PIRSF | Cyclin_A_B_D_E | 1 | 374 | IPR046965 | GO:0016538|GO:0044772 | |
Stsc271969g00010 | 385 | SUPERFAMILY | Cyclin-like | 228 | 367 | IPR036915 | - | |
Stsc271969g00010 | 385 | Gene3D | - | 97 | 361 | - | - | |
Stsc271969g00010 | 385 | PANTHER | CYCLINS | 69 | 352 | IPR039361 | - | |
Stsc271969g00010 | 385 | SMART | cyclin_7 | 135 | 219 | IPR013763 | - | |
Stsc271969g00010 | 385 | SMART | cyclin_7 | 232 | 320 | IPR013763 | - | |
Stsc271969g00010 | 385 | Gene3D | - | 113 | 226 | - | - | |
Stsc271969g00010 | 385 | Pfam | Cyclin, C-terminal domain | 228 | 364 | IPR004367 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc271969g00010 | Stsc-Chr271969 | 38419 | 40479 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc271969g00010 | 3 | 375 | Core Cell Cycle Gene Families | AT1G47230 | 50.000 | 1.78e-118 | 347 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc271969g00010 | K06627 | - | pop:7472680 | 376.326 |