Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271968g00012 ATGGGTGAAGTGAAGCCATATTTTGCAGTGGTTCTAATGCAATTCATATATGCCGTGATGACCTTGTTGACTAAGGCAGTGTTTAACCAAGGCATGAATAGCTTTGTGTTCATCTTCTATAGACAAATGCTGGGAACCGTTATTTTGGTCCCTCTGGCCTTCATATTTGAACGAAAAAGTGCAGTGCCTCTCTCGTTCATGACCTTCTTGAAGATTTTTGTGCTCTCGTTTATCGGGCTTACTCTGACCTTGAATATTTATAGCATTGCACTTGTTTATACCTCTGCCACTTTGGGTGCTGCATTTGTTAATTGCCTCCCCGCTTCTACTTTCTTCCTTGCTGTCATTCTCAGAATGGAAAAGGTAAATATAAAGACAGAGTCAGGGGTTGCAAAGATTGGAAGTGTGTTGCTTTGCATTGGTGGTGTGGTGATTCTTGCATTATACAAAGGACCACACTTAGGGACACTACATCATCTCGTATCTGGAAACCACCACTACCACACTCACCATCTTTCATCAAGAGGCCAAAAATGGATACTCGGCTCTTTACTCTTTTTCTTGGCCGTAATCACTTGGAGCTTTTGGCTTGTCATTCAGGCTCAATTTCTCAAAAGCTACCCTTCAAAGCTATATTTCACGAGCCTGCAGATCCTATCAAGTGCAATTCAATCATTTTTCGTTGCTATTGCTTTTGAAAGAGATTTTCAGCAATGGAAGTTGGGTTGGGATATGAGACTGCTTACAGTTGTCTACACTGGGATACTGGTGAACGGGGTGGTATACAACTTGCAAGCTTGGGTGATAGAAAAGAGAGGGCCTGTTTTCTCAATAATATGGAACCCACTCAGTTTCGTAATGGCTACCACTGGTTCTATATTACTCTTGGGTGAGCCCCTACATTTAGGCAGTGTTGTGGGTGGGATCATGCTGGTACTAAGTCTGTACAGTGTTTTGTGGGGAAAAAGCAAAGATGGAGTGAGTCATCAGAAATCACTAATGCTGCCGGTTAAAGCACCAAATCAATGTGGAGTCGGAGACGCCAAAATATCAGAGCCATAA 1062 0.4256 MGEVKPYFAVVLMQFIYAVMTLLTKAVFNQGMNSFVFIFYRQMLGTVILVPLAFIFERKSAVPLSFMTFLKIFVLSFIGLTLTLNIYSIALVYTSATLGAAFVNCLPASTFFLAVILRMEKVNIKTESGVAKIGSVLLCIGGVVILALYKGPHLGTLHHLVSGNHHYHTHHLSSRGQKWILGSLLFFLAVITWSFWLVIQAQFLKSYPSKLYFTSLQILSSAIQSFFVAIAFERDFQQWKLGWDMRLLTVVYTGILVNGVVYNLQAWVIEKRGPVFSIIWNPLSFVMATTGSILLLGEPLHLGSVVGGIMLVLSLYSVLWGKSKDGVSHQKSLMLPVKAPNQCGVGDAKISEP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271968g00012 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Stsc271968g00012 353 PANTHER WAT1-RELATED PROTEIN 6 326 IPR030184 GO:0016020|GO:0022857
Stsc271968g00012 353 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020
Stsc271968g00012 353 Pfam EamA-like transporter family 6 130 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271968g00012 Stsc-Chr271968 100801 106114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271968g00012 1 253 Nodulin-like Gene Family AT5G64700 52.713 1.54e-83 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271968g00012 - - vun:114162763 435.647