Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271963g00012 ATGGGAGGTAGAATTTCAAGTGTCACTACTACTTTTGCTATCATAGTGGTTCTCTTAGGCACAATAACATGTGAAGCACAGTTATCTTCAACATTTTATGATACTTCATGCCCCAATGCACTTACTACCATTCGCAACACTATTCGCACGGCGGTTTCTAAGGAGCGCCGCATGGCGGCTTCTCTTGTTCGCCTTCATTTCCATGACTGCTTTGTTCAGGGTTGTGATGCATCAATTTTGCTAGATGATAGTCCTCCTACAATTGTGAGTGAGAAAGGTGCATTTGCTAATAATAACTCAATTAGAGGATATGAAGTCATAGATCAAGCTAAAGCTGCCGTGGAGAAAGTATGCCCCGGAGTGGTTTCGTGCGCAGACATTGTTGCTGTAGCTGCTCGTGATGCATCATTCGCAGTTGGTGGTCCATCATGGGTTGTGAAGCTTGGACGCAGAGATTCAAGTACCGCAAGTATTATTTTGGCTAACACTGATCTTCCACTTGCCTCAGATGATCTTACAACTCTCATCTCTAAATTCAATAACAAAGGACTTAGTGCAAGAGAAATGGTCACTTTATCTGGTGCCCATACAATTGGACAAGCTCGATGTGTCACTTTCAGAAACAGAATATATGGTAATTCAAGTGACATTGATGCTGGTTTTGCTAGAACTCGCCAACGTGGTTGTCCATCTTTGAACAGCAATGACAACAATAAAAGGTTGTCACCATTGGACTTGGTCACACCAAATTCTTTTGATAACAACTATTTCAAGAACTTGATTCAGAAGAAGGGTCTTCTTCAATCGGATCAAGTTCTGTTCAGTGGAGGATCTACAGATTCCATTGTTTCTGAGTATAGCCAAAACCCTACAACTTTTAAATCGGACTTTGCTGCTGCTATGATAAAAATGGGAGATATCTCCCCTTTGACTGGATCAGCAGGAATCATAAGAAAAATTTGCATTTCTTTCCGACGGTTTTGCTTCCCACGGTGGCCCAACAAGTGGTATCAGAGGCGATGGTTGATCAACTTGGTTTTAAGGAGTATTTATGAGAAGCATCGAAAATCTTCTCGACAAGGTGGTTTGAGCGGCGAGTCCCGCGGTTTGTGCGGCGTTGTGATGGACGAATACTCGAAACATGGTGAAGGAGCTAGGGGAGATGTGCTCAATGTGAAGACTCACACTTGA 1191 0.4282 MGGRISSVTTTFAIIVVLLGTITCEAQLSSTFYDTSCPNALTTIRNTIRTAVSKERRMAASLVRLHFHDCFVQGCDASILLDDSPPTIVSEKGAFANNNSIRGYEVIDQAKAAVEKVCPGVVSCADIVAVAARDASFAVGGPSWVVKLGRRDSSTASIILANTDLPLASDDLTTLISKFNNKGLSAREMVTLSGAHTIGQARCVTFRNRIYGNSSDIDAGFARTRQRGCPSLNSNDNNKRLSPLDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFSGGSTDSIVSEYSQNPTTFKSDFAAAMIKMGDISPLTGSAGIIRKICISFRRFCFPRWPNKWYQRRWLINLVLRSIYEKHRKSSRQGGLSGESRGLCGVVMDEYSKHGEGARGDVLNVKTHT 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271963g00012 396 SUPERFAMILY Heme-dependent peroxidases 27 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 Gene3D Peroxidase, domain 2 166 304 - -
Stsc271963g00012 396 CDD secretory_peroxidase 27 321 IPR033905 GO:0004601|GO:0042744
Stsc271963g00012 396 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Stsc271963g00012 396 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Stsc271963g00012 396 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 ProSiteProfiles Plant heme peroxidase family profile. 27 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 FunFam Peroxidase 166 304 - -
Stsc271963g00012 396 FunFam Peroxidase 31 175 - -
Stsc271963g00012 396 Gene3D - 31 321 - -
Stsc271963g00012 396 Pfam Peroxidase 45 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 PANTHER PEROXIDASE 72-RELATED 25 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc271963g00012 396 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271963g00012 Stsc-Chr271963 87926 90544 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271963g00012 7 321 Peroxidase AT1G14550 63.091 4.80e-141 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271963g00012 K00430 - gmx:100786161 513.457