Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271963g00003 ATGTCGCGCACTGCGACGACGTCGGCATTCACTAAATCCAAGACCCTCGACAACAAATATATGCTGGGAGATGAGATTGGGAAAGGAGCTTATGGTCGAGTTTACAAAGGTTTGGACCTGGAGAATGGAGACTTTGTTGCAATTAAACAAGTCTCCTTGGAGAATATTGCACAGGAGGATCTCAACATCATCATGACCCAATTGAGGTTGAGATGGACATCTGGGGCTCTCGTGGTGGCTTGA 243 0.4691 MSRTATTSAFTKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMTQLRLRWTSGALVVA 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271963g00003 80 SUPERFAMILY Protein kinase-like (PK-like) 11 67 IPR011009 -
Stsc271963g00003 80 ProSiteProfiles Protein kinase domain profile. 20 80 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc271963g00003 80 Gene3D Phosphorylase Kinase; domain 1 1 71 - -
Stsc271963g00003 80 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 15 67 - -
Stsc271963g00003 80 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271963g00003 1 70 MAP Kinase Kinase Kinase AT3G13530 82.857 1.47e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Stsc271963g00003 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271963g00003 - - gmx:100813256 122.479