Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271961g00024 ATGGCGCAAATTCCATCACCACCACTCATCAAAGTCCATCAAGTGTACAAGGTAAGGCCGTCACAAACCACCACCACCACCACAACCCTTCCCCTCACCTACTTCGACTTAGTATGGCCAAGGCTTCCACCACTTCAGTGTCTCTTCTTCTACGAATTCCCAAACCCATCCATTTCTTTCTTTGACTCTCTTCTTCCCAATCTCAAACGCTCCCTTCAGCTCACTCTCCAACACTTCTTCCCCCTCGCCGGTAACATCATCACTTGCCCACAACATTCTCCCGTTCCCACCATCACCTACTTCCCCCAACAAGATTCCGTTTCTCTCACTATATGCGAATCAAACGACGACTTTGACCAAATTTCCTCCGATTTCTGTGAGATCTCTAAACGGCACCGTTTGTTACCTAGCTTGAGTGTTTCCGATGACAAAACATCTATGCTAGCATTACAGGTTACTTTCTTTCCGAATTCCGGCTTTGTCATCGGAATAACAGCTAACCATGCAGGTGTCGATGGAAATAGCTCAGCGGTTTTTCTTCATGCTTGGGCCTACACGTGCTCCAAGATCATGCAAAATCCATCCTTGTCATCAATATCGTTACCTCAAACTCTAACACCATTTCTTGACAGGTCCGTTATAAAGGACCCAAAAGGACTCGCCCAATCGTTCGTCGACACGTGGCGGTGGCTGAACCTGTTTGGACCAAACAATAGGAGCCTATGGGAAACTAATAACAACAACCAAGAAGGAGCAGAAAGCGATAATGAATCAATTAAAGGCGTGTTTAAATTGAAGCCCTCGCATATTGAAAAGCTAAAGAATTATGCGAAATCTAAAACCGTTATTGCAAGAGTTTCAACTTTTTCTGTTATAACTGCTTACTCTCTATCATGCTTAGTGAAAACAGAAGAAGCAGAGATCAACGAGGAAGAAGTTGTTCTTATGTTCCCTGTGGATTTTAGATCGAGATTGGGAGCAGAGATTCCTCCAACTTATTTCGGTAACTGCATCTTGCCTCGTTTGGTTTACGAAGAGAAAGAGAAGGTGATGGCGAACGAAGGATTCATTACGGTGCTGAAAGGGATAAGCGAGGTTTTGGTTGGGTTGGAGAGTGGGGTTTCCAATGACGAAGAAAAATGGAAGAAGAAACTTGAATCTGCTTTGGTGGAAGGGAAGAAGAGAGTGTACTCCGTTGCTGGCTCAATCCGGTTCATGGTTTATGGGGTTGATTTTGGTTATGGAAGACCTAAGAAAGTTGATGTTCCTTCTGTGGATAGAACTAAAGCTTTTGCACTTTCTGAGAGTAGAGATGGTGACGGTGGTGTTGAGATTGCTTTAACTTTGAAGAAGAAACAAATGGAGGCCTTTTCATCTCTTTTTTATCACCAAATTCAATCTTTTCTTATATGA 1413 0.4345 MAQIPSPPLIKVHQVYKVRPSQTTTTTTTLPLTYFDLVWPRLPPLQCLFFYEFPNPSISFFDSLLPNLKRSLQLTLQHFFPLAGNIITCPQHSPVPTITYFPQQDSVSLTICESNDDFDQISSDFCEISKRHRLLPSLSVSDDKTSMLALQVTFFPNSGFVIGITANHAGVDGNSSAVFLHAWAYTCSKIMQNPSLSSISLPQTLTPFLDRSVIKDPKGLAQSFVDTWRWLNLFGPNNRSLWETNNNNQEGAESDNESIKGVFKLKPSHIEKLKNYAKSKTVIARVSTFSVITAYSLSCLVKTEEAEINEEEVVLMFPVDFRSRLGAEIPPTYFGNCILPRLVYEEKEKVMANEGFITVLKGISEVLVGLESGVSNDEEKWKKKLESALVEGKKRVYSVAGSIRFMVYGVDFGYGRPKKVDVPSVDRTKAFALSESRDGDGGVEIALTLKKKQMEAFSSLFYHQIQSFLI 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271961g00024 470 PANTHER - 10 467 - -
Stsc271961g00024 470 Gene3D - 255 468 IPR023213 -
Stsc271961g00024 470 Gene3D - 10 233 IPR023213 -
Stsc271961g00024 470 Pfam Transferase family 13 463 - -
Stsc271961g00024 470 SUPERFAMILY CoA-dependent acyltransferases 263 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271961g00024 Stsc-Chr271961 94952 96738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271961g00024 10 462 Monolignol Biosynthesis Gene Families AT5G48930 25.159 3.62e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271961g00024 - - gmx:100800849 423.32