Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271961g00017 ATGGCCTTTGAGGAATCTGAGTTTATGATTCCGGAGCTAGAAATAGAGGAAAACCTGATCGCCGCGGCGAGGCACGTTGTGAGGGCATTAGGATCAAAGAAGAATCTAACCGGCGACGCCAAGAAGATTCTTGCAGATCTCGGCACTCAGCTGCATTCAATTAGTATAGTGATTTCAAAAGAAGAAGAAGAACAACAAGAACAAGAAGAAAGGCTAAAATTCATCGAGGAGGTGATCATGAATCTGGAGGAGGATCAGATCGAGTATTTAAACGCCGCCGACGAAGCGCGACGGTTGATCGAGAAGCTTGAGAGCTTGCACATAAGCAAAGAGGACAAAGAATATAAGCTTTTAAATAGAGCTTATAGCATTCTCCAAACCGCCATGTCTCACATCGAACAAGTTTTCAAGAACTTGCTTAGCCAGAACATGCAGCCTTTTGAGCCTGAATATGTGTCGTTTAGATCAAACGAAGAGGACCTTCACCTCGCCGGCGATGAGAATTCCGTCGCGTCGTCGTTCGAATTGGCCGAATCGTTCCGGCGAGACAGCATGAACAAAGCCTCAGAGGATTACGTTCTTGATCTGGTTAGTCCAGATGTGATTCCGCATCTTCGGTGCATTGCTAATTTGATGTGTGCTTCTGGTTATGGCCAGGAATGTTGCCATGCTTACACCATGGCGCGAAGGGAGGCGTTGGAACAATGCTTCGCCGTTCTTGAAATTGAGAAATTCAGCATCGAGAATATTCTCAAAATGGAATGGAATACTCTGAATTCCAAGATCAAGCGGTGGATTTGGGCGGTGAGAGTGTTCGTTAGGGTTCTTGCAAGCGAGAAGTGGCTTTCTGACCGGATTTTCGGGGAAGGCGAACCGGCAAGCCAAGCTTGTTTTGTTGATGCGTCAAAGCCGTCGATGTTGCAGCTTCTCAACTTCGCGGGAGCCGTTTCGATCGGCCCCCGCAAGCCAGAGAAGCTGTTCAAAATCCTTGACATGTATGAGGCCCTTTCGAGCCTCATGCCAGAGATTAACGACTTGTTTCAAGACAAGGCTGGCTCGTTAGTTCGGCGCGAATGCCTCGAGACTATATCGCGGTTAGGCGATTGCGTGAGAGGTACGTTTCTTGAATTCGAGCATGCCATTGCATCAGACGTTTCAACAAGTCCTTTCGTTGGAGGTGGAATCCATCCATTGACGAGATATGTGATGAACTATCTCGAAACTCTGACTGATTACCGAGATATACTTAATCGGCTCCTGAGGGACAAACAAGAAACAGAGGAGGGAGCGTGGATGGCGTGCCACTTCCGGTCCGTCGCATCGATCCTAGAATGCAATCTTGATGAAAAATCTAAGTTGTATAAAGATCTTCCATTGCAGCACCTCTTCTTAGTGAATAATATCCAGTATATGACTAGAAAGGTTAAAGGATCCGATGAACTCGGGTCAATATTCGGCGACGATTGGATCCGAAAGCGAAAATCAAAGTACAGGCAGCACGCATTGAATTACCAGAGGTATAGTTTGAGTTGCATTCTTTCGTTGCTTAAAGATGATGGAATCCAAATGCAGGGTAGTAGTGCTAGTAGTAATGTTGTGTCAAAGAATGTTCTTAAAGAAAAGTTAAGAAGGTTCAACATTGCATTTGAGGATCTTTATAGAATCCAAACAGGTTGGAACATTCCAGATAGTCAGCTTCGTGAAGAACTGCAAATCTCGCTGTCTTTGAAAGTGGTTCAGGCTTATAGAACATTTGTAGGGAGGCATAGTAATCAGATTAGTGAGAAGCATGTTAAATATAGTGCTGAAGATTTAGAAGGATATATTTTGGATTTCTTTGAGGGAGCTGCAAAATCCTTGCATAGTCCCCGGAAGAGTTAA 1881 0.4498 MAFEESEFMIPELEIEENLIAAARHVVRALGSKKNLTGDAKKILADLGTQLHSISIVISKEEEEQQEQEERLKFIEEVIMNLEEDQIEYLNAADEARRLIEKLESLHISKEDKEYKLLNRAYSILQTAMSHIEQVFKNLLSQNMQPFEPEYVSFRSNEEDLHLAGDENSVASSFELAESFRRDSMNKASEDYVLDLVSPDVIPHLRCIANLMCASGYGQECCHAYTMARREALEQCFAVLEIEKFSIENILKMEWNTLNSKIKRWIWAVRVFVRVLASEKWLSDRIFGEGEPASQACFVDASKPSMLQLLNFAGAVSIGPRKPEKLFKILDMYEALSSLMPEINDLFQDKAGSLVRRECLETISRLGDCVRGTFLEFEHAIASDVSTSPFVGGGIHPLTRYVMNYLETLTDYRDILNRLLRDKQETEEGAWMACHFRSVASILECNLDEKSKLYKDLPLQHLFLVNNIQYMTRKVKGSDELGSIFGDDWIRKRKSKYRQHALNYQRYSLSCILSLLKDDGIQMQGSSASSNVVSKNVLKEKLRRFNIAFEDLYRIQTGWNIPDSQLREELQISLSLKVVQAYRTFVGRHSNQISEKHVKYSAEDLEGYILDFFEGAAKSLHSPRKS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271961g00017 626 Gene3D Exocyst complex component Exo70 70 622 - -
Stsc271961g00017 626 SUPERFAMILY Cullin repeat-like 85 614 IPR016159 -
Stsc271961g00017 626 PANTHER EXOCYST COMPLEX PROTEIN EXO70 62 615 IPR004140 GO:0000145|GO:0006887
Stsc271961g00017 626 Pfam Exo70 exocyst complex subunit 263 610 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc271961g00017 626 Coils Coil 58 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271961g00017 Stsc-Chr271961 64628 66508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271961g00017 12 622 EXO70 exocyst subunit family AT3G29400 44.109 2.70e-169 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271961g00017 K07195 - adu:107471287 932.169