Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271960g00014 ATGCAGAAACCTAGAATTTGCATATTAGGCGGTGGATTTGGTGGTTTATATACTGCTCTCAGGCTTGAGTCTCTTGAATGGCCTGACGATAAAACTCCTCAGATTGTTCTTGTTGACCAGTCTGAACGTTTTGTTTTTAAGCCCTTGTTGTATGAGCTTCTATCCGGAGAAGTAGATGAATGGGAAATAGCTCCTCGCTTCTCAGATTTGCTGGTAAACACTAGTATAGTGTTCTTCAAAGACAGAGTGAAGTGTTTGCATCCCTCTGACAATTGGAGAATGAATGAATCCCCCAAAGCATCTAGTTCTGCAGGAACTGTTCATCTTGAAAGTGGACTTCTTATCGAGTATGACTGGCTGGTTCTCTCATTGGGAGCTGAAACTAAACTAGATGTTGTACCAGGAGCAGCAGAATTTGCCTTTCCATTCTCAACACTCGAGGATGCTCGTAAAGTTAACAATAAATTGACAACATTAGAGAGAAAGACCTTTGGTAAGGACTTCCAAATTAACGTGGCTGTTGTTGGTTGTGGTTATTCGGGAGTTGAATTAGCTGCAACGATAGCTGAACGGTTACAAAATAAGGGAATTGTTAGGGCAATTAACGTCGACACAATTATCTGTCCAAATGCCCCACCTGGCAATAGGGAAGCTGCACTGAAAGTTCTTTCCTCCCGAAGAGTTGAACTTTTGTTGGGTTATTTTGTCCGCCGTATTCGGAGGGGGAGTGAGTTGAAATCTGAAGATTCCCCAACAGGGCTAGATGAGAGTAGAACTGAAGCAGCAAATGATTTTGAGAGATATATATTGGAGCTGCAGCCCGCTGAAAGAGGAAAAGAAAGTAAATTCATTGAAGCTGATCTTGTCTTGTGGACTGTTGGATCTAAGCCTCCTCTTGATCAGCTTGAACCTTCAGATGAACCATATGTACTTCCACTTAATGCCCGGGGTCAAGCGGAAACAGATGAAACTCTTCGTGTAAAGGGTCACCCACGGATATTTGCTCTTGGCGACTCTTCTGCACTAAGGGATTCAAAGGGAAGGATCCTTCCAGCCACGGCACAGGTTGCATTTCAGCAAGCAGACTTTACTGGTTGGAATCTGTGGGCTGCAATCAACGGTCGCCCGCTTCTTCCATTTAGGTTTCAGAATTTAGGTGAGATGATGACACTGGGAAGAAACGATGCCGCCATCTCTCCAAGTTTTGTGGAGGGGCTAACCTTAGAAGGACCTGTTGGCCATACTGCGAGGAAGATAGCATATTTAACGAGGCTACCAACAGATCAACATAGGCTAAAAGTGGGCATAAGCTGGCTTACAAAATCTGCTATTGATTCAGTGTCATTGCTACAAAGTACCTTAACAAAGGTTTTATCGAGCTCATAG 1386 0.4372 MQKPRICILGGGFGGLYTALRLESLEWPDDKTPQIVLVDQSERFVFKPLLYELLSGEVDEWEIAPRFSDLLVNTSIVFFKDRVKCLHPSDNWRMNESPKASSSAGTVHLESGLLIEYDWLVLSLGAETKLDVVPGAAEFAFPFSTLEDARKVNNKLTTLERKTFGKDFQINVAVVGCGYSGVELAATIAERLQNKGIVRAINVDTIICPNAPPGNREAALKVLSSRRVELLLGYFVRRIRRGSELKSEDSPTGLDESRTEAANDFERYILELQPAERGKESKFIEADLVLWTVGSKPPLDQLEPSDEPYVLPLNARGQAETDETLRVKGHPRIFALGDSSALRDSKGRILPATAQVAFQQADFTGWNLWAAINGRPLLPFRFQNLGEMMTLGRNDAAISPSFVEGLTLEGPVGHTARKIAYLTRLPTDQHRLKVGISWLTKSAIDSVSLLQSTLTKVLSSS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271960g00014 461 Gene3D - 1 434 - -
Stsc271960g00014 461 PRINTS FAD-dependent pyridine nucleotide reductase signature 171 189 - -
Stsc271960g00014 461 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Stsc271960g00014 461 PRINTS FAD-dependent pyridine nucleotide reductase signature 286 302 - -
Stsc271960g00014 461 Pfam Pyridine nucleotide-disulphide oxidoreductase 5 361 IPR023753 GO:0016491
Stsc271960g00014 461 FunFam Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 1 434 - -
Stsc271960g00014 461 PANTHER APOPTOSIS-INDUCING FACTOR 1 2 457 - -
Stsc271960g00014 461 PRINTS Pyridine nucleotide disulphide reductase class-I signature 333 340 - -
Stsc271960g00014 461 PRINTS Pyridine nucleotide disulphide reductase class-I signature 171 196 - -
Stsc271960g00014 461 PRINTS Pyridine nucleotide disulphide reductase class-I signature 5 27 - -
Stsc271960g00014 461 SUPERFAMILY FAD/NAD(P)-binding domain 1 367 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271960g00014 Stsc-Chr271960 34825 37453 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271960g00014 2 362 Chloroplast and Mitochondria Gene Families AT4G21490 22.727 7.12e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271960g00014 K17872 - gmx:100795521 797.349