Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271960g00010 ATGAAAACTCTCTTCCTTGTCCCGTTCCTTGCACCAAGTGTCCCAGTTGGAAGCAGACCTTTCTCTCAACATTTAACCACCAAGTGCTTTGGCAAGCAACTTCACTTCCACAATCCATATGTTCTTTTCTCTTCATACACATGTTCTGCAACACTATCTGCTGTGCCGGAATTACAAGAGAAGGAAACATTTGATGGAGAAAAGGCTTCTTTGCTTGTCAAAGATCTCAGAAACACCTACAATACAGGGAAGACAAAGAGCTACGAGTGGCGAATTTCACAGTTGGAAGGCATAGCCAAGATGCTAGAAGAGAAGGAGAAGGAAATTCTTGAAGCTCTTTATAAAGACCTTTCTAAACCAAGATTGGAAGGATTTATCGCTGAGGTTTCTCAGGCAAAATCATCATGTAGTGAAGCAATTCAAGAACTAAAACACTGGATGAAGCCTGAAAAGATCAAAACTTCATTCACCACATTCCCATCATCAGCGGAGATTGTGTCAGAACCACTAGGAGTTGTGTTGGTCATCTCAACATGGAACTTCCCTTTCTTGTTATCAATGGATCCTGTGATTGGAGCCATATCAGCGGGTAACGCAGTGGTCCTGAAACCATCAGAAATTGCTCCAGCAACTTCATCAGTACTTCTAAATTTGATTGAAGGTTATCTAGATAACTCTGCAATCAGAGTTGTTGAAGGGGCTATTCCTGAAACAACTGCACTTTTGGAGCAGAAGTGGGACAAGATACTTTACACAGGTAGTGCTAGGGTAGGTCGCATTGTCATGGCTGCTGCCGCAAAGCACCTTACACCTGTAATTCTGGAACTTGGTGGAAAGTGTCCAGCTGTTGTTGATTCAGATGTTAATTTACAAGTTAAGAGCATCTCCATCCTAAGCTTATTATTCACACGTTCAAGTAACTTGTTTTTCTCAAGCATATGTAATAATCATTGA 954 0.414 MKTLFLVPFLAPSVPVGSRPFSQHLTTKCFGKQLHFHNPYVLFSSYTCSATLSAVPELQEKETFDGEKASLLVKDLRNTYNTGKTKSYEWRISQLEGIAKMLEEKEKEILEALYKDLSKPRLEGFIAEVSQAKSSCSEAIQELKHWMKPEKIKTSFTTFPSSAEIVSEPLGVVLVISTWNFPFLLSMDPVIGAISAGNAVVLKPSEIAPATSSVLLNLIEGYLDNSAIRVVEGAIPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVDSDVNLQVKSISILSLLFTRSSNLFFSSICNNH 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271960g00010 317 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 277 IPR016162 GO:0016491
Stsc271960g00010 317 PANTHER ALDEHYDE DEHYDROGENASE 69 294 IPR012394 GO:0006081
Stsc271960g00010 317 FunFam Aldehyde dehydrogenase 77 281 - -
Stsc271960g00010 317 SUPERFAMILY ALDH-like 72 292 IPR016161 GO:0016491
Stsc271960g00010 317 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 278 294 IPR016163 GO:0016620
Stsc271960g00010 317 Pfam Aldehyde dehydrogenase family 75 293 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271960g00010 Stsc-Chr271960 18600 20599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271960g00010 39 299 Aldehyde Dehydrogenase Gene Family AT4G34240 69.732 8.56e-121 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271960g00010 K00128 - gmx:100800699 467.618