Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271959g00018 ATGGCTACAATGTTAATAATGTTCATGTTAGCTCTTTATTCTGACATATCTTATGCAGCTACATACAAAGTTGGAGATGCAGCTGGTTGGAGCTTTCATGTTGATAACTGGCCTAATGGAAAGCACTTTGTAGCCGGCGATACACTTGTATTCAGTTATGCTGTCGGAGCACATAACGTGGTGCTAGTAAACCAAGCCGGTTATGATGGATGTAGTACTCCACCAGGAAGCGCCGTGCATACATCAGGGAACGATCAAATCCAGCTCGTCAAAGGAATGAACTATTTCATTTGCAATTTTCCTGGTCATTGTGAGGGAGGGATGAAAATTGCAGTCAATGCTGCATGA 348 0.4282 MATMLIMFMLALYSDISYAATYKVGDAAGWSFHVDNWPNGKHFVAGDTLVFSYAVGAHNVVLVNQAGYDGCSTPPGSAVHTSGNDQIQLVKGMNYFICNFPGHCEGGMKIAVNAA 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271959g00018 115 ProSitePatterns Type-1 copper (blue) proteins signature. 92 108 IPR028871 -
Stsc271959g00018 115 FunFam basic blue protein-like 20 114 - -
Stsc271959g00018 115 Pfam Plastocyanin-like domain 34 108 IPR003245 GO:0009055
Stsc271959g00018 115 CDD Plantacyanin 20 114 IPR041844 -
Stsc271959g00018 115 PANTHER BLUE COPPER PROTEIN 19 113 IPR039391 GO:0009055
Stsc271959g00018 115 ProSiteProfiles Phytocyanin domain profile. 20 115 IPR003245 GO:0009055
Stsc271959g00018 115 SUPERFAMILY Cupredoxins 20 114 IPR008972 -
Stsc271959g00018 115 Gene3D - 18 115 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271959g00018 Stsc-Chr271959 116047 116948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271959g00018 1 114 Phytocyanin Superfamily AT1G17800 38.333 7.61e-22 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271959g00018 - - zju:125424248 157.147