Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271959g00016 ATGGAAGCTCTAGCACTAGGAGAAGAACCACTTAGCGACTTCGATTTTGACGCCTTTCTGCAACAATCACCGGAGCTTCACGTTGACGATATCTTCCATGATGAGGAAGCTCCTTCTTTTGTAGCCGGTGACGGTGTTTTATCGGAGATCGAGAACTTGTTGATGGCCGACGATGTAGACGACGGCGCTGCCATCCCTGCGACTCCGTCGTTGGAGTCTGACTATGACAAGCTTCTTGCTGAAATACTCGTCGAGCCGAACGGCAGTGACTCCGACGACGGTTACACTCCCTCTAACGAAGATCCCGATAAGGACAGGGCTGATGCCGCGGATCCTAAAGAGAATGGGACCGAACCCGTTTCGAATAATCTAACTAGGAAGATGAGGAACAGAGATGCTGCTGTGAGATCAAGAGAGAGGAAGAAGTTGTATGTAAAGGACCTTGAGATGAAAAGTAGGTATTATGAAGGGGAATGCCGAAGACTGGGGCATTTGCTCCAGTGCTGCTTTGCTGAGAACCACGCTTTGCGTCTTTGTTTGCAGGCACGAGGTGCATTAAATGCTTCCATGACCAAGCAGGAGTCTGCTGTGCTCTTGTTGGAATCCCTGCTGTTGGGTTCCCTGCTGGTGTTCATGGGAGTCATATGCCAACTCAGTTTACGCCTGATAGCTTTGTCAATAGTACTACTTCCAAGAGAAAACAAAGAGAAGAGAAACGAAAGAAGGGTAGCTCGAAAAGGACCAGAAAATGATATAACTGAATCTGAGTGTTTCTCGATGCGATCCTCTACAAAGTGTAGAAGTTGTCGGGCTTCAAGGAGAAAGATGAAGTTCAATATTCTTGCATTCTATAACTTTTGA 861 0.4715 MEALALGEEPLSDFDFDAFLQQSPELHVDDIFHDEEAPSFVAGDGVLSEIENLLMADDVDDGAAIPATPSLESDYDKLLAEILVEPNGSDSDDGYTPSNEDPDKDRADAADPKENGTEPVSNNLTRKMRNRDAAVRSRERKKLYVKDLEMKSRYYEGECRRLGHLLQCCFAENHALRLCLQARGALNASMTKQESAVLLLESLLLGSLLVFMGVICQLSLRLIALSIVLLPRENKEKRNERRVARKGPENDITESECFSMRSSTKCRSCRASRRKMKFNILAFYNF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271959g00016 286 MobiDBLite consensus disorder prediction 97 113 - -
Stsc271959g00016 286 CDD bZIP_HY5-like 126 174 - -
Stsc271959g00016 286 Gene3D - 123 182 - -
Stsc271959g00016 286 MobiDBLite consensus disorder prediction 86 135 - -
Stsc271959g00016 286 Pfam Basic region leucine zipper 126 162 IPR004827 GO:0003700|GO:0006355
Stsc271959g00016 286 SMART brlzneu 118 182 IPR004827 GO:0003700|GO:0006355
Stsc271959g00016 286 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 91 250 - -
Stsc271959g00016 286 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 126 140 IPR004827 GO:0003700|GO:0006355
Stsc271959g00016 286 SUPERFAMILY Leucine zipper domain 125 178 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271959g00016 Stsc-Chr271959 102720 105964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271959g00016 135 283 bZIP Transcription Factor Family AT1G42990 45.395 2.00e-17 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc271959g00016 bZIP_2 8.4e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271959g00016 - - ahf:112743660 409.453