Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271956g00013 ATGTCGTCGGAGACGCAGGAAACGGAGTCCTCTCGGATTCTGCGGCAGATCAACGAGTTGAAGCAAGAAAGGTCCGCAATTGACACCAAAATATCTGCGCTTCAATCTCAGCTCAACAATCTTCATCTCAAAAACGGCGTCGTATCCAATGGCTCTTCGTCGAACTCAGAAAACGCCTTGGAGCCTCACATGATCTACAGATACAGTCGTCACCTTCTGCTTCCTTCTTTTGGTGTTCAAGGTCAGGCAAATCTGTTGAAGGCATCAATTTTGGTTGTGGGAGCTGGAGGATTGGGTTCCCCTGCATTGCTATACCTTGCAGCTTGTGGTGTTGGCCGCTTGGGTATTGTAGATCATGATGTGGTTGAGCTGAATAATATGCATAGGCAGATTATCCATACAGAAGCATATATTGGTCAGCCGAAAGTGAAATCCGCTGCTGCTGCTTGTCGCGCGATCAACTCGACTATTCAGATTGTGGAGCATCAAGAAGCTTTGCGGACCTCCAATGCTTTGGAAATATTCAGCAAATATGATATAATAGTAGATGCTACAGATAATGCTCCTAGCAGGTACATGATCAATGACTGCTGTGTGGTACTAGGAAAGCCTCTTGTATCTGGTGCTGCACTGGGATTGGAAGGGCAGCTCACTGTTTACAATTATAATGGTGGTCCTTGCTATCGATGTCTCTTTCCAACTCCACCACCTACAACAGCATGCCAAAGATGTGCTGATAGTGGAGTTCTAGGAGTAGTTCCTGGTATAATTGGTTGTCTCCAAGCTCTTGAGGCAATCAAGATTGCAGCTTCTGTTGGTGAACCTCTCTCAGGAAGGATGCTTCTCTTTGATGCATTGTCTGCACGGATTCGTATTGTTAAAATTAGAGGAAGGTCCATGCAATGTGAAGTTTGCGCAGAAAACACAACCTTTAAGCAAAAGCAATTCCAAGAATTTGACTATGAAAATTTCACTCAAACTCCCTTATCTGTGGGTCCTTTGAGGCTAAATCTACTTCCCACTGAATCAAGAATCAGCAGCAAGGAGTATAGCGACATAGTTCTTAATAAGGAACCGCACGTGTTGCTCGACGTTAGACCAGCTCACCATTTCAAGATTGTATCACTCCCCAAAACCCTGAACATTCCTCTGTCAACTCTAGAGGCTAGGTTGCCTGAAATATCAACAGCGCTGAAGAAAGAGGAAGAAGAGAAAGGTGTAGCTTCTGGCTTAAGTGCACAATTGTATGTTGTATGCAGAAGGGGAAATGATTCTCAAAGGGCTGTTCAGTATCTTCAGAAAATGGGTTACACTTCTGCCAAAGATATAGTTGGGGGATTAGANNNNNNNNNNTCCCACAATGTGGATCCAAGCTTCCCTACATATTAG 1389 0.4413 MSSETQETESSRILRQINELKQERSAIDTKISALQSQLNNLHLKNGVVSNGSSSNSENALEPHMIYRYSRHLLLPSFGVQGQANLLKASILVVGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQIIHTEAYIGQPKVKSAAAACRAINSTIQIVEHQEALRTSNALEIFSKYDIIVDATDNAPSRYMINDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALEAIKIAASVGEPLSGRMLLFDALSARIRIVKIRGRSMQCEVCAENTTFKQKQFQEFDYENFTQTPLSVGPLRLNLLPTESRISSKEYSDIVLNKEPHVLLDVRPAHHFKIVSLPKTLNIPLSTLEARLPEISTALKKEEEEKGVASGLSAQLYVVCRRGNDSQRAVQYLQKMGYTSAKDIVGGLXXXXSHNVDPSFPTY 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271956g00013 462 FunFam Adenylyltransferase and sulfurtransferase MOCS3 61 310 - -
Stsc271956g00013 462 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 65 428 IPR035985 GO:0008641
Stsc271956g00013 462 Pfam ThiF family 68 303 IPR000594 -
Stsc271956g00013 462 FunFam Adenylyltransferase and sulfurtransferase MOCS3 343 462 - -
Stsc271956g00013 462 CDD ThiF_MoeB_HesA_family 67 295 - -
Stsc271956g00013 462 Gene3D - 63 311 - -
Stsc271956g00013 462 SMART rhod_4 346 456 IPR001763 -
Stsc271956g00013 462 Coils Coil 3 37 - -
Stsc271956g00013 462 Gene3D - 343 462 IPR036873 -
Stsc271956g00013 462 ProSiteProfiles Rhodanese domain profile. 356 455 IPR001763 -
Stsc271956g00013 462 Pfam Rhodanese-like domain 348 447 IPR001763 -
Stsc271956g00013 462 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 34 462 IPR028885 GO:0002143|GO:0004792|GO:0005829
Stsc271956g00013 462 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 61 316 IPR045886 -
Stsc271956g00013 462 Coils Coil 384 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271956g00013 Stsc-Chr271956 72548 75959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271956g00013 111 462 Sulfurtransferasese or Rhodanese AT5G55130 73.371 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271956g00013 K11996 - gmx:100801820 728.013