Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271955g00013 ATGGGATCTCTACTTGAACCAGTTGCAGCAGAATTTATCTCCAAACTCGGAGATCTGGTGGTGAATCACACTGTGAAGCACTTTCAATATCTGATTTGCCATAAGAGACTTGTAGGCACCCTCAGGAAGGAACACGAGAAGCTCAAGGGCATGAAAGAGGCACTGAAAGGGAAAGTAGAAGCTGATAGAAGGAGTAGACTTCAAATTGCAGATAACGTCCAACAATGGCTCTCTGATGTGGAAGCCATTGATGCCGAGGTTCAAAAACTCATTGAAGATGCTGAACAAAACAGGCATAAGAAATCCATTGGTGGAATGTGCCCAAATTTCGGTGATAACTACTCATTGGGGAAGCATGCAACAAAAACATCGCAAGAAATTGCAAGCTTAGTTGCTGAAAAGGATAAACTTTTTCCTATATCTTACTCTAAACCTGCACTAAGGCTTGGGTCTACCTTCACTCAAGAAATCAAGGGTTTGGAGTCAAGAAACAAGATCATTGGAGATGTTGTGGAGAAGCTGAAGGATGACAAGATCAAAAGGATGAGCATTTGTGGCATGGGCGGGGTGGGAAAAACCACTCTGGTGAAAGGTGTTATCAAAGTTGTTGAATCACAAAAGCTGTTCGATAAGGTTGTGATGGCTGTGGTGTCTCAAAATCCAAATTACCAAATGATCCAAGCTCAAATTGCTGATGGGTTGGGGTTACAATTCAGAAGTGGGAGCATGCAAGGAAAAGCAGGGGAATTACTTGATTACTTGAACGGAATCAATAGGTTGTTGATAGTGTTTGATGATGTGTGGTCGGAGCTTGATTTTGAGAGCATTGGAATTCCTTCCCTTGAGCATGAGAAGGTGTGCAAGATTTTGTTCACATCTCGCAAGCTAGACACATGTCTCAAGATGAAAAGTGAGGAGAATATCCAGCTTCATGTCTTGCCTGAAGAGGAAGCGTGGGACCTATTTCGAGACATGGCGGGGGTGGACACTACAGACAGGGCTACCATAAAGCACATTGCAAGAGAGGTTGCAAAAGAATGTAGAGGGTTGCCCCTTGCTATTGTGACAATTGGAAGTGGGCTGCGAAGCAAGGCTAAGCCTCAATGGGAGCATGCTCTTGAGCAACTAAAGCATTCCCAGTTAGAGGATAAGGTTCAATCAAGCATTGAGGTTAGCATTAAATCTTTGGGAAATGAGGAACACAAATATTGCCTTTTTCTTTGTGCCTTGTTTCCTGAAGACTTTGATGTTCCGGTGGAGTGCGTGTTGCGTCATGCTGTGGGGATGAGATTGATTGATTTCGTTGGTGCGCTGGGAAAAGCAAGAAACAAGGTGGACACTTTGGTGGATGACCTCAAGAGGTGCTTCTTGTTGCTGGATAGCAGAGTACCAGGTTGTGTGAAGATGCATGATGTTGTGCGCGATGTTGTTCTATCAATTGCATCTCGAAAAGAGCATGGTTTTGCGGTGCAGCAAGGTTGTGGTGAATTGAAGCAGTTGAAGAAACAAGACAAAGTGGATCATTTCAGAAAATTGTCACTCATTTTGCAAGATGCAATCCCCGACGGCATGGAGTTACAAAATGGCTTACACTGTCCGATGCTTGAGCTCTTCCAAGCGCGATCAGAAAGAGAGGAAGCTGTTTCGTGGCCAGAAAATTTCTTGCAAGGAATGAGTAAGATGAGAGTTTTGACAATGAACAAATTGAGCATCCCAAACATGTCGTCTCTTTTCCAAACCTGTGTGAACTTAAGTACATTGCAATTGGAAGATTGTGATGTTGGAGACGTGTCCGTGATTGGCAACATTCTTGTGCAACTCGAAATCTTAAGCTTCTCCGGCTCGAACATTAAAGAACTTCCGGCTGAAATTGGGCAACTAAGCTCTCTAAAATTGCTGGACTTGACAGCATGTGAAGAGCTTGCTTTCATTTCAGATAATGTGTTTGCGAGATTGATTCAACTGGAAGAACTTTATTTCAGGGTAAATAATTTTCCTTGGATGCTAAACGAGGCCATTCTTGGTGAGTTGAGAGAGCTTTGTCAACACTTGAAGGTTTTTGAGATCCAAGTAAGAGAGGTAGAAATTCTGCCTAGAGATTTGAGTTTCAAAAACCTAGAGAGGTTTTGGATTTATGTGGCTTCTTCATATGTTTATTATTCATGGGATCCTCGTCGTGTTGGATATGTGGAGCCAAATACAATAGTGTTGCGAGATACAAGTTACAACAAGTGTATGAAGGGTAGTTCAGTAGTAATGCAATTGATTAAGAGATGTGAAGTTCTCAGTTTAGGAAGGGTGAAGGAGTTGAAAAATGTGATGAGCGAGTTAGATGATAGTGGATTCCAATGCTTGACATATCTACAGCTTCATGATTGTCCAGATGTTGAGTATGTAGTAGATCGGATGAGTGCCTTCCCGCTATTGAAGTCATTGTCAATTCAGTATCTCCCAAAGCTAAGGGAGATATGTAAGGTATCCCAAAATGATAGCGAACTCAACAACTCATTCTCAAATTTAGAGGAACTGCATTTGAATTCTCTTCCAATATTCACTGGCTTCAGCAATGCCATGGATTCAAGTGAGGCACCTTCATCATCATCACATTCATCTCATCATGGTTCAAATGAAAGAGGTGAGGGTACTCAAAGTGTGGAAGAGGAGTCTATGTCTAAATCAAATTGTGATGCGAGTTGCCACAACAAGTTATTTTCATCATTTTGGATGCTGAAATTTCCAAGATTGGAATCCATCAACTTAGACGCCTGCGATTCCTTGGAGGAAGTATTTGACATGCAAGAATATTCAAAGTCCTCCAATTCCCAAATGTTTCCTCACCTGCGAGATATCACAATAGAATATCTTCCTAAGCTCAAATATGTGTGGGATTCTGCCAAGTTACAATGGCCATCATTGACAACATTCATTTTTCAAAAATGTCCCAAGTTGAAGGCATCTCTGATAGAAAACAATGAGGAGTGTAAGAAATCAAAAGAAAACAATTCATCAAGCTCATTTCATCGGCCCCTTATTGCTGGTTGCATGCCTTGTCCACTTAAATTTGTTGGACGACGTAATCAAGACGACACTACAAGCATGGAAGCATCATTGGCACAAGATCAACAACTTGCAATTTCTGAAATTAAGGGCAAGGCAGAAACAAGCCATGTACCAGTTCTTGAATACCTTCATCTAGAAGACTGTGATTTAGTGGAAGAAGTAGTTTTGCTTGAGGAAACTCATGATTCCAAGACTGACATTTGTGATCATGACAGTATGAAAAAAAGAACAAGTACGATGGTTACTTTCACTCATTTGGTGTCAGTGAAATTGATTAACCTACCAAATCTTGAGAATTTTTGTTCTTTCAAGAAGCAAGATGGATGGGATTCTGAGAGAATAATCAGAAGAAACCCTTTTATTAATGGGTTATTAGTTCCAAACTTAACATCTCTAAAGATGTATAGGTGTGACAAAATAAAGACATTGTTCTGTTTTTCAAGTTTTGGAAGTCTTCAGAATTTAGAAGTAAGTGATTGCAAGAACATAGAAGAAATAGTGTCCAAAGAAAAGATTAACACAAGTGCAGATCAAGTCATGTTCCCAAAATTAGAGACTCTAAAACTTGAAAGCTTACCAATGTTGAAAGCCTTCTGTCAAGCATCCTATGCCTTTGAGTTCCCTTCTCTGCAAAAAGTACTGATTGAAGATTGCATGAATATGGAAGTGTTTTCGGGGGGATCTTGTCGTACAACTAAGCTTGAGAATGTCACTATGAATTCAAATGCTACAAACTCAGGGTGCGATATATTTGTGCAAAAAGGAAACTTGAATGCCACTGTTGAGGGATTTAAAGCATTCATGGCTTTACGAGAAGAAATAAAATTGATAAGGTGGAGCGATCTCCATGATAAAGGCATAACCAAGAACTTGTTTGAAATCTCCATTCTGAATATCAATGGGTTTCCTCAACTCTCAAAGCTTATTCAGCTCAAGGAGATGCACATGCTTCAACATGTGAAGGAACTAAGAATAACAAGCTGTGATTCATTGGAAGAGGTTTTTGAATCAACAGGAAGAATGCTTACAAAGGAAGGATATGATCAAAATATAAATCATTATGAGTTACAGAGGATAAAATTCCAAGATTTACCAAAAGTAAGGCATGCAAGTTTTGGCAAGTTAACTTCAATTGAAATTGCAAGATGCAACAATTTAAAATGTGTGGTTTCCTATTCTGTTGCCAAAAGCCTTGTGGAGATAAAAGAACTAAAAGTTAACAACTGTGAGATGATAGAAGAAATAGTTAAAAAAGAAGAGGAAGAGAAAAACATCAACATTGATGGAGGCAGCAAAGACAAGACCTTATTTCCCAAATTGGAGAAGTTGAGTCTTGAGCGATTGCCGAATCTGAGATGCGTCTGTTATGGAGATTATGACTATGACATCCCATTGAGAAATGAAGATGAAGAGGATGAGAAGCAGCATGAACATGTGCAGATCTCATTTCCACAGTTAAAAGAATTAAGTTTAAGTGATGTGCCCAACCTCCAATGTTTCTGTGGAGGTTCATATGACTATGATCCAATGCTTTTATCCCCTTCTTCACATATGGATATTTTTCCAAATGGAAATGGAAAAGTCATTGTAAGCACACCTGAGCTTCACAAGGTTAATAATGAGATGCTCACTTTTGGAGACATCAATTTGACATTATATTATCTTCTCAAATATTCAGATAAATATAAGGTGGAGTTGCAAGAAGTAGAGACATTTGAAGGCATTGATGAGAAACCTCAATACAAACACTTGGTGGGTTACATGAGCAGGGTACCAAGGCTTCATGTTGAGAGTTGCAACAAGCTTCTCAAATGTGTCCCATCCAACGCCATTCATTCATTATTATTCCAACATATCGAAGAGCTTCATGTACGGCAATGCCAGAATATGGAAGTTGTATTTGAAGAGAATGGCACTGATGGGATTGATAAATCAGAATTAATAACGATGGAGTTGCATTCTCTACCGAAACTGAAACACATTTGGAGAAACAACAACTCTGTTATTAAAGGCTTTGAGAATCTGACATATCTAATAATTAGAGGGTGCCATGATTTGAAGTTTGTGTTTGCAGATGTGTCCGTAGCCAGAAGCCTTCCGAATCTGTCTCAACTTGAAGTGGAAGAATGTGAAGAAATGGAAGAGATTATTGAAAACAATAACAACAATAAAATTGTGAATCAAAAGGTGGCTAAGATTATATTCCCATCTTTGTATCGCATTAAGCTGAGCAAGTTAGCGAAGCTAAAGTGGTTCTGTTCAATAAGCTCTTTCTGTTTCGAGCTACCATATTGTGGTTGGATAGAAATAAAAGAATGCCCAAAGATGGAGAGCTTCTGCCATGCACCCTTATACACACCATGGCTACCGATAATCACGGTGGATGAGGCAGAGTGCGATCGCCCTGAGGAAGTGAACGAAACGATACGACAACGACACCGTAAATTCTCATGA 5514 0.3975 MGSLLEPVAAEFISKLGDLVVNHTVKHFQYLICHKRLVGTLRKEHEKLKGMKEALKGKVEADRRSRLQIADNVQQWLSDVEAIDAEVQKLIEDAEQNRHKKSIGGMCPNFGDNYSLGKHATKTSQEIASLVAEKDKLFPISYSKPALRLGSTFTQEIKGLESRNKIIGDVVEKLKDDKIKRMSICGMGGVGKTTLVKGVIKVVESQKLFDKVVMAVVSQNPNYQMIQAQIADGLGLQFRSGSMQGKAGELLDYLNGINRLLIVFDDVWSELDFESIGIPSLEHEKVCKILFTSRKLDTCLKMKSEENIQLHVLPEEEAWDLFRDMAGVDTTDRATIKHIAREVAKECRGLPLAIVTIGSGLRSKAKPQWEHALEQLKHSQLEDKVQSSIEVSIKSLGNEEHKYCLFLCALFPEDFDVPVECVLRHAVGMRLIDFVGALGKARNKVDTLVDDLKRCFLLLDSRVPGCVKMHDVVRDVVLSIASRKEHGFAVQQGCGELKQLKKQDKVDHFRKLSLILQDAIPDGMELQNGLHCPMLELFQARSEREEAVSWPENFLQGMSKMRVLTMNKLSIPNMSSLFQTCVNLSTLQLEDCDVGDVSVIGNILVQLEILSFSGSNIKELPAEIGQLSSLKLLDLTACEELAFISDNVFARLIQLEELYFRVNNFPWMLNEAILGELRELCQHLKVFEIQVREVEILPRDLSFKNLERFWIYVASSYVYYSWDPRRVGYVEPNTIVLRDTSYNKCMKGSSVVMQLIKRCEVLSLGRVKELKNVMSELDDSGFQCLTYLQLHDCPDVEYVVDRMSAFPLLKSLSIQYLPKLREICKVSQNDSELNNSFSNLEELHLNSLPIFTGFSNAMDSSEAPSSSSHSSHHGSNERGEGTQSVEEESMSKSNCDASCHNKLFSSFWMLKFPRLESINLDACDSLEEVFDMQEYSKSSNSQMFPHLRDITIEYLPKLKYVWDSAKLQWPSLTTFIFQKCPKLKASLIENNEECKKSKENNSSSSFHRPLIAGCMPCPLKFVGRRNQDDTTSMEASLAQDQQLAISEIKGKAETSHVPVLEYLHLEDCDLVEEVVLLEETHDSKTDICDHDSMKKRTSTMVTFTHLVSVKLINLPNLENFCSFKKQDGWDSERIIRRNPFINGLLVPNLTSLKMYRCDKIKTLFCFSSFGSLQNLEVSDCKNIEEIVSKEKINTSADQVMFPKLETLKLESLPMLKAFCQASYAFEFPSLQKVLIEDCMNMEVFSGGSCRTTKLENVTMNSNATNSGCDIFVQKGNLNATVEGFKAFMALREEIKLIRWSDLHDKGITKNLFEISILNINGFPQLSKLIQLKEMHMLQHVKELRITSCDSLEEVFESTGRMLTKEGYDQNINHYELQRIKFQDLPKVRHASFGKLTSIEIARCNNLKCVVSYSVAKSLVEIKELKVNNCEMIEEIVKKEEEEKNINIDGGSKDKTLFPKLEKLSLERLPNLRCVCYGDYDYDIPLRNEDEEDEKQHEHVQISFPQLKELSLSDVPNLQCFCGGSYDYDPMLLSPSSHMDIFPNGNGKVIVSTPELHKVNNEMLTFGDINLTLYYLLKYSDKYKVELQEVETFEGIDEKPQYKHLVGYMSRVPRLHVESCNKLLKCVPSNAIHSLLFQHIEELHVRQCQNMEVVFEENGTDGIDKSELITMELHSLPKLKHIWRNNNSVIKGFENLTYLIIRGCHDLKFVFADVSVARSLPNLSQLEVEECEEMEEIIENNNNNKIVNQKVAKIIFPSLYRIKLSKLAKLKWFCSISSFCFELPYCGWIEIKECPKMESFCHAPLYTPWLPIITVDEAECDRPEEVNETIRQRHRKFS 1837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271955g00013 1837 Gene3D Ribonuclease Inhibitor 527 890 IPR032675 -
Stsc271955g00013 1837 PRINTS Disease resistance protein signature 181 196 - -
Stsc271955g00013 1837 PRINTS Disease resistance protein signature 347 361 - -
Stsc271955g00013 1837 PRINTS Disease resistance protein signature 625 641 - -
Stsc271955g00013 1837 PRINTS Disease resistance protein signature 254 268 - -
Stsc271955g00013 1837 Gene3D - 312 396 IPR042197 -
Stsc271955g00013 1837 Gene3D - 148 311 IPR027417 -
Stsc271955g00013 1837 SUPERFAMILY L domain-like 547 1273 - -
Stsc271955g00013 1837 Gene3D Ribonuclease Inhibitor 1043 1267 IPR032675 -
Stsc271955g00013 1837 Gene3D Ribonuclease Inhibitor 1293 1524 IPR032675 -
Stsc271955g00013 1837 Gene3D Ribonuclease Inhibitor 1602 1818 IPR032675 -
Stsc271955g00013 1837 FunFam Probable disease resistance protein At1g61300 146 307 - -
Stsc271955g00013 1837 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1032 1255 - -
Stsc271955g00013 1837 SUPERFAMILY RNI-like 1391 1800 - -
Stsc271955g00013 1837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 408 IPR027417 -
Stsc271955g00013 1837 MobiDBLite consensus disorder prediction 859 890 - -
Stsc271955g00013 1837 Pfam NB-ARC domain 165 389 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271955g00013 Stsc-Chr271955 96588 105322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271955g00013 179 484 WRKY Transcription Factor Family AT5G45050 26.415 4.66e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271955g00013 - - aip:107647161 1346.26