Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271955g00011 ATGGTTTTCACGCCCGAGGATCAGATTCTTGTGGGTTTGGCCGTCGCTGTTGTGGCCATTGGCGTTGGTGCTTTCTACATCTACTCTTCCAAGAAGCCCAAAGTTTGCTTGGACCCTGAGAAGTTCAAGGAGTTCAAGCTTGTCAAGCGGCAACAACTGAGCCATAATGTGGCAAAGTTCACATTTGCGCTTCCAACACCGACTTCCGTTTTGGGTCTTCCAATTGGGCAACACATAAGTTGCAGGGGTAAGGATGGCCAGGGTGAGGAGGTTATCAAACCATATACCCCTACTACTTTGGATTCAGATGTTGGACATTTTGAACTTGTTATTAAGATGTACCCACAAGGTAGAATGTCTCACCATTTCCGTGAGATGAAGGTCGGTGACTATCTTGCTGTAAAAGGACCCAAGGGACGTTTCAAGTACCAACCTGGCGAAGTTAGAGCCTTTGGGATGCTTGCTGGAGGATCTGGAATCACTCCAATGTTCCAGGTTGCTAGGGCTATATTAGAAAACCCACAAGACAAGACTAAGGTTCACCTTATCTACGCCAATGTGACATATGAGGACATTCTTTTGAAGGACGAACTTGATGGCCTTGTTGCTAACCATCCAGATCAGTTCAAGGTGTACTATGTCTTAAATCAGCCTCCTGAATCATGGAACGGCGGTGTCGGATTCGTCTCAAAGGAGATGATTCAAGCTCATTGCCCTGCTCCAGCAAATGATATCAAGATGTTAAGATGTGGGCCACCACCAATGAACAAGGCCATGGCTGGTCACCTTGAAGCACTCGGATATGCCCCTGAGTCACAGTTCCAGTTCTGA 831 0.4693 MVFTPEDQILVGLAVAVVAIGVGAFYIYSSKKPKVCLDPEKFKEFKLVKRQQLSHNVAKFTFALPTPTSVLGLPIGQHISCRGKDGQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMKVGDYLAVKGPKGRFKYQPGEVRAFGMLAGGSGITPMFQVARAILENPQDKTKVHLIYANVTYEDILLKDELDGLVANHPDQFKVYYVLNQPPESWNGGVGFVSKEMIQAHCPAPANDIKMLRCGPPPMNKAMAGHLEALGYAPESQFQF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271955g00011 276 SUPERFAMILY Riboflavin synthase domain-like 34 145 IPR017938 -
Stsc271955g00011 276 PANTHER NADH-CYTOCHROME B5 REDUCTASE 31 276 IPR001834 GO:0016491
Stsc271955g00011 276 FunFam NADH-cytochrome b5 reductase 134 276 - -
Stsc271955g00011 276 PRINTS Cytochrome B5 reductase signature 93 100 - -
Stsc271955g00011 276 PRINTS Cytochrome B5 reductase signature 129 143 - -
Stsc271955g00011 276 PRINTS Cytochrome B5 reductase signature 71 82 - -
Stsc271955g00011 276 PRINTS Cytochrome B5 reductase signature 190 201 - -
Stsc271955g00011 276 PRINTS Cytochrome B5 reductase signature 246 254 - -
Stsc271955g00011 276 PRINTS Cytochrome B5 reductase signature 152 171 - -
Stsc271955g00011 276 FunFam NADH-cytochrome b5 reductase 35 134 - -
Stsc271955g00011 276 Pfam Oxidoreductase FAD-binding domain 45 143 IPR008333 -
Stsc271955g00011 276 CDD cyt_b5_reduct_like 45 276 - -
Stsc271955g00011 276 Gene3D - 135 276 IPR039261 -
Stsc271955g00011 276 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 40 144 IPR017927 GO:0016491
Stsc271955g00011 276 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 132 272 IPR039261 -
Stsc271955g00011 276 Gene3D Translation factors 35 134 - -
Stsc271955g00011 276 Pfam Oxidoreductase NAD-binding domain 153 259 IPR001433 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271955g00011 Stsc-Chr271955 82020 86433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271955g00011 25 276 NADPH P450 reductases AT5G17770 85.317 1.12e-167 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271955g00011 K00326 - gmx:100816447 491.5