Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc271953g00001 | ATGGTAGTGAAGGTGTATGGTCCAGCATATGCTTCTCCCAAACGGGTGCTGGTGTGTCTGATTGAGAAACAGATTGAGTTTGAAACAGTGGATGTTGATCTCTTCAAGGGGGAACATAAGGAACCCGAGTTCCTCAAGTTGCAGCCTTTTGGAGTTCTTCCTGTTATTCAAGATGGTGATTATACACTATATGAGTCTCGCGCAATAATCAGGTACTATGCCGAAAAGTTCAGAGATCAAGGGACTGAATTGCTGGGAAAGACAATTGAAGAGAGGGGTCTTGTGGAACAATGGCTTGAAGTTGAAGCCCACAATTTCCAACCTCCAATCTACAACTTAGTCATAAATGTTTTATTTTCCCCAATTCTTGGTGTTCCCTCGGATGCAAAAGTGATTCAAGAGAGCGATGAAAAGATTGCAAAGGTGCTTGACATTTACGAGGAGAGGTTGTCAAAGGCAAAGTACTTAGCCGGGGATTTCTTCAGCCTTGCTGATCTTAGCCATCTCCCATTTGGTCATTATCTGGTGAACCAAACTGGGAGAGGGAATTTGGTTAGAGAAAGGAAGCATGTGAGTGCTTGGTGGGATGATATTAGTAACAGGCC | 605 | 0.4364 | MVVKVYGPAYASPKRVLVCLIEKQIEFETVDVDLFKGEHKEPEFLKLQPFGVLPVIQDGDYTLYESRAIIRYYAEKFRDQGTELLGKTIEERGLVEQWLEVEAHNFQPPIYNLVINVLFSPILGVPSDAKVIQESDEKIAKVLDIYEERLSKAKYLAGDFFSLADLSHLPFGHYLVNQTGRGNLVRERKHVSAWWDDISNRP | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc271953g00001 | 202 | CDD | GST_N_Phi | 2 | 76 | - | - | |
| Stsc271953g00001 | 202 | SUPERFAMILY | Thioredoxin-like | 3 | 81 | IPR036249 | - | |
| Stsc271953g00001 | 202 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 81 | IPR004045 | - | |
| Stsc271953g00001 | 202 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 2 | 202 | - | - | |
| Stsc271953g00001 | 202 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 88 | 202 | IPR010987 | - | |
| Stsc271953g00001 | 202 | SFLD | Glutathione Transferase (cytosolic) | 5 | 201 | IPR040079 | - | |
| Stsc271953g00001 | 202 | Pfam | Glutathione S-transferase, C-terminal domain | 113 | 202 | IPR004046 | - | |
| Stsc271953g00001 | 202 | FunFam | Glutathione S-transferase F2 | 86 | 202 | - | - | |
| Stsc271953g00001 | 202 | SFLD | Main (cytGST) | 5 | 201 | - | - | |
| Stsc271953g00001 | 202 | SUPERFAMILY | GST C-terminal domain-like | 78 | 202 | IPR036282 | - | |
| Stsc271953g00001 | 202 | Gene3D | Glutaredoxin | 1 | 85 | - | - | |
| Stsc271953g00001 | 202 | Pfam | Glutathione S-transferase, N-terminal domain | 2 | 74 | IPR004045 | - | |
| Stsc271953g00001 | 202 | Gene3D | - | 86 | 202 | - | - | |
| Stsc271953g00001 | 202 | FunFam | Glutathione S-transferase F2 | 2 | 85 | - | - | |
| Stsc271953g00001 | 202 | CDD | GST_C_Phi | 90 | 202 | IPR034347 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Stsc271953g00001 | Stsc-Chr271953 | 1 | 1352 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Stsc271953g00001 | 1 | 201 | Glutathione S-transferase Gene Family | AT2G30870 | 61.194 | 3.36e-96 | 277 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stsc271953g00001 | K00799 | - | gmx:100499911 | 373.629 |