Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271952g00034 ATGGACTTCGAAAACCTCCTCTCCCAACCACCCATATTCACCGTGGCTGTGCTATTCTTCTCTCTCTTTGCTCTTTCATTTCTACCAAGAATGCACGTCGGCAAAACCGGAGCAAGAAAAGCACCACCAGAAGCTGGTGGAGCATGGCCACTAATCGGCCATCTCCACCTCTTAAGTGGCCCACAGCCACCGCATGTCACCTTAGGCAAAATGGCTGACAAATATGGACCCATTTTCACCATACGTATTGGCAGCCGCAAGAATTTGATCGTGAGCAACAGCGAGCTGGCCCGAGAATGTTTCACTGTGAATGACAAAGCTTTTGCCGCCCGCCCTAAAATGACAGCCTTTGAAGTTTTGGGCTATAACTATGCAATATTCACGTTCGCCACCTATGGCTCCAGTTGGCGTAACCTCCGGAAGATGGCCATCTTGGAAGTCCTCTCCCACCACAAGATACACATGAACAGTCACGTGATGCTCTCGGAGGTGAAAACCGCAATGAAAGATAGTTACAACAACAGCAACAAAAAGAGCATGGTGGTTACTGAGATGGATAAATGGTTTGGGGAGATTAGCTTGAATGTGTTGTTCAGGCTAGTGGTGGGAAAACGTTTCAGTGGATACAGTAAAGAGAACGAACGGATCCGGAAAGCCTTGAGGAGTTTCTTTGATCTTGCTGCATTGGTCGTGATCGGTGACGCAATTCCGTGGTTGAGATGGTTGGATCTAGATGGGAAAGAGAAGGTCATGAAGAAAACAGCAAAAGAGTTGGATGGATATGTTCAAACATGGTTAGATGAACACAGACATAGCAGAAACCATGGCGCAGACCGCGATTACTTGGATGCGCTTATTTCCAATATTGGTCAAGGCTTTGACGGTTACGACGTTGACACTCTAATCAAAGCTTCGTCCCTGACACTAATTTTAGCAGGTACAGACACAACGGTTGGAACATCAACTTGGGCTCTTTCATTACTTTTAAACAATCGCGAAGCCTTAAATAAAGTTGTTCATGAATTAGACTCAAAAATAGGAACAAAAAGAACTGTGGTAGAAACCGATCTAAAAGACCTTGTATATCTTCAAGCAATTGTTAAAGAAACATTACGCTTGTACCCTCCCGCAATGCTCAATGTGCCTCACGAAGCCACAGAAGATTGTGTGGTGGGTGGATACTATATCCCTGCTGGCACGCAACTTGTGACTAATCTTTGGAAAATACAACGAGATCCTACTGTATATCCTGATCCATTAGAATTTCGACCCGACAGGTTTTTCACAACTCACAAAGATGTCGACCTTAGGGGTCAACATTTTGAACTGACTCCATTTGGTGCAGGAAGAAGGATGTGTCCTGGAATATCATTTGGACTTCAAATGGTGGAGTTAACACTTGCTAATGTGTTGCATGGGTTTGACATTGTAACAGTTGACGGAAAATCAGTTGATATGGCTGAACGTGTTGGGTTAACCAATGTCAAAGCTAATCCGCTCAAAGTAATTCTGACACCACGTCTCTCTGCTGAAGCTTATGCTTAA 1545 0.4453 MDFENLLSQPPIFTVAVLFFSLFALSFLPRMHVGKTGARKAPPEAGGAWPLIGHLHLLSGPQPPHVTLGKMADKYGPIFTIRIGSRKNLIVSNSELARECFTVNDKAFAARPKMTAFEVLGYNYAIFTFATYGSSWRNLRKMAILEVLSHHKIHMNSHVMLSEVKTAMKDSYNNSNKKSMVVTEMDKWFGEISLNVLFRLVVGKRFSGYSKENERIRKALRSFFDLAALVVIGDAIPWLRWLDLDGKEKVMKKTAKELDGYVQTWLDEHRHSRNHGADRDYLDALISNIGQGFDGYDVDTLIKASSLTLILAGTDTTVGTSTWALSLLLNNREALNKVVHELDSKIGTKRTVVETDLKDLVYLQAIVKETLRLYPPAMLNVPHEATEDCVVGGYYIPAGTQLVTNLWKIQRDPTVYPDPLEFRPDRFFTTHKDVDLRGQHFELTPFGAGRRMCPGISFGLQMVELTLANVLHGFDIVTVDGKSVDMAERVGLTNVKANPLKVILTPRLSAEAYA 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271952g00034 514 PANTHER CYTOCHROME P450 82C3-RELATED 21 513 - -
Stsc271952g00034 514 FunFam Cytochrome P450 82C4 32 505 - -
Stsc271952g00034 514 SUPERFAMILY Cytochrome P450 48 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00034 514 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00034 514 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00034 514 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00034 514 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00034 514 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00034 514 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00034 514 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00034 514 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00034 514 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00034 514 Gene3D Cytochrome P450 35 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00034 514 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00034 514 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00034 514 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00034 514 Pfam Cytochrome P450 45 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00034 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271952g00034 Stsc-Chr271952 121386 123661 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271952g00034 18 513 Cytochrome P450 AT4G31940 45.560 4.41e-161 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271952g00034 - - gmx:100787630 663.299