Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271952g00033 ATGGCTGACAAATATGGACCCATTTTCACCATACGCGTTGGCGGCCGCAAGAATTTGATCGTGAGCAATAGCGACATGGCCCGAGAGTGTTTCACTGTGAATGACAAGGTTTTCGCCGCCCGCCCTAAGATGACAGCCTTTGAAATTCTGGGTTACAACTATGCAATATTCACGTTCACCACCTATGGCGCCTGTTGGCGTAACCTCCGGAAGATGGCCATCTTGGAAGTCCTCTCCCACCACAAGATAGAGATGAACAGTCACGTGGTGCTATCAGAGGTGAAAACCGCAATGAAAGATAGTTACAACAACAGCAACAAAAAGAGCATGGTGGTTACGGAGATGGATAAATGGTTTGGGGAGATTAGCCTGAACGTGTTGTTCAGGTTAGTGGTGGGAAAACGTTTCACTGGTTACAGTGAAGAGAACGAACGGATCCGGAAGGCCTTTAGGAGTTTCGTTGATTTTGCTGCATCGTTTATGATTGGTGACGCAATTCCGTGGTTGAGATGGTTGGATCTAGATGGTGGAGAGAAGGCCATGAAGAAAACAGCAAAAGAGTTGGATGGATATGTTCAAACATGGTTAGATGAACACAGACGTAGCAGAAACCATGGTGCAGAGCGCGATTACATGGATGCGCTTATTTCCAATATTGATCAAGGCTTTGACACTTACGACGTTGACACTCTAATCAAAGCTTCGTTTCTGACACTAATTTTGGCAGGTACAGACACACCAGTTGTAACATCAACTTGGGCTCTTTCATTACTTTTGAACAATCGCAGAGCCTTAAGTAAAGTTGTTAATGAATTAGACTCAAAAATAGGAACAAAAAGAACTGTTGTAGAAACAGATCTAAAAAATCTTATATATCTTCAAGCCGTTGTTAAAGAAACATTGCGTTTGTATCCTCCCCTAGTGCTCGGTGTGCCTCACGAAGCAACAGAAGATTGTGTGGTGGGTGGATACTATATTCCTGCTGGCACGCAACTTTGGACTAATATTTGGAAAATACAACGAGATTCTACTTTATATCTTGACCCATTAGAATTTCGTCCGGAGAGATTTCTCACAACTCATAAAGACATTGATCTTAAGAGTCAGCACTTTGAATTGATTCCATTTGGTGCAGGAAGAAGGATGTGTCCTGGAAAGTCATTTGGGCTTCAAATGGTACAGTTAACACTTGCTAATGTGCTGCATGGGTTTGATATTGTAACAGTTGATGGAAAGCCGGTTGATATGGCTGAAAGTGTTGGGTTATCAAATGCCAAAGCCAATCCGTTAAAAGTTATTCTAACACCGCGTCTCTCTGCCGAAGCTTATGCTTAA 1335 0.4285 MADKYGPIFTIRVGGRKNLIVSNSDMARECFTVNDKVFAARPKMTAFEILGYNYAIFTFTTYGACWRNLRKMAILEVLSHHKIEMNSHVVLSEVKTAMKDSYNNSNKKSMVVTEMDKWFGEISLNVLFRLVVGKRFTGYSEENERIRKAFRSFVDFAASFMIGDAIPWLRWLDLDGGEKAMKKTAKELDGYVQTWLDEHRRSRNHGAERDYMDALISNIDQGFDTYDVDTLIKASFLTLILAGTDTPVVTSTWALSLLLNNRRALSKVVNELDSKIGTKRTVVETDLKNLIYLQAVVKETLRLYPPLVLGVPHEATEDCVVGGYYIPAGTQLWTNIWKIQRDSTLYLDPLEFRPERFLTTHKDIDLKSQHFELIPFGAGRRMCPGKSFGLQMVQLTLANVLHGFDIVTVDGKPVDMAESVGLSNAKANPLKVILTPRLSAEAYA 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271952g00033 444 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00033 444 PRINTS P450 superfamily signature 295 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00033 444 PRINTS P450 superfamily signature 242 259 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00033 444 PRINTS P450 superfamily signature 374 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00033 444 PRINTS E-class P450 group I signature 2 21 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00033 444 PRINTS E-class P450 group I signature 122 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00033 444 PRINTS E-class P450 group I signature 373 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00033 444 PRINTS E-class P450 group I signature 335 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00033 444 PRINTS E-class P450 group I signature 383 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00033 444 PRINTS E-class P450 group I signature 294 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00033 444 PRINTS E-class P450 group I signature 231 248 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00033 444 PRINTS E-class P450 group I signature 251 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00033 444 PRINTS E-class P450 group I signature 26 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00033 444 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 376 385 IPR017972 GO:0005506|GO:0016705
Stsc271952g00033 444 SUPERFAMILY Cytochrome P450 1 437 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00033 444 Gene3D Cytochrome P450 1 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00033 444 Pfam Cytochrome P450 2 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00033 444 FunFam Cytochrome P450 82C4 1 435 - -
Stsc271952g00033 444 PANTHER CYTOCHROME P450 82C3-RELATED 1 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271952g00033 Stsc-Chr271952 118414 120057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271952g00033 1 443 Cytochrome P450 AT4G31940 44.181 1.47e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271952g00033 - - gmx:100787630 569.311