Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271952g00032 ATGGACTTGGAAAACCTCCTCTCCCATCCAGCCTTATTCACCATGGCTGTGCTACTTTTCTCTCTCTTTGCTCTTTCATTATTTCTATCAACAAGGCATGGAACAAGAAAAGCACCACCAGAAGCTGCTGGAGCATGGCCACTAATCGGGCACCTCCACCTCTTAGGCGGCCCACAGCCACCGCACGTCACCTTGGGCAACATGGCCGACAAATATGGACCCATCTTCACCATCCGCATCGGTGGCCGCAAGAAATTATTAGTTGTGAGCAATAGCAAGATAGCCAAAGAGTGCTTCACTGTAAATGACAAAGCTCTCGCTGGCCGCCCCAAAATGGTAGCCTTTGAAGTTCTGGGCTACGACTATGCCATATTCTCCTTCAAATCCTATGGCCCTTATTGGCGTAGCCTCCGCAAAACAGCCATCTTGGAAGTCCTCTCCGACCACAAGATACACATGAACAGTCACGTGATGCTGTCGGAGGTGAAAACCGCAATGAAAGATAGTTACAACAACAAGAGCATGGTGGTTACGGAGATGGATAAATGGTTTGGGGAGATTAGCCTGAACGTGTTGTTCAGGTTAGTGGTGGGAAAACGTTTCTCGGGTCAGAGTGAAGAGAACGAACGGATCCGTAAGGCGCTGAGGGATTTCTTTGATCTTGGTGCGTCGTTCGTGGTTGGTGATGCAATTCCATGGTTGAGATGGCTGGATTTGGATGGGGGAGAGAAGGCCATGAAGAAAACGGCAAAAGAGTTGGATGAATTTATGCAGAACTCATTAGATGAACACAAACGTAGCAGAAACCATGGTGCAGAACGTGATTACATGGACAAGCTTATTTCCACCATTGATGAAGGCTTTGACGGTGGAGATGTTGATACTATAATCAAAGCTACATCCCTGACACTAATTTTGGCTGGTACAGACACAACAACTGGAACACTTGTTTGGGCTCTTGCTTTACTTTTGAATAATCGCCAAGTTCTAAATAAAGCTATTCATGAATTAGACGCACATATAGGAACAAATAGAACTGTGGAAGTAACAGATCTAAATAATCTTGTGTATCTTCAAGCCATTGTTAAAGAAACACTTCGAATGCATCCGCCTGTGGTCCTCAATTTGCCCCACGAATCCATGAACGATTGTGAGGTAGGTGGATACCATATTCCAGCTGGCACGCAGCTTTGGACTAATATTTGGAAAATACAACGAGATCCTGCTTTATATCCTAATCCTTTAGAGTTTCAACCTGAGAGATTTCTGGAAACTCACAAAGATGTTGATCTTAGGGGTCAGCACTTTGAATTGATTCCATTTGGTGCTGGAAGAAGAATATGTCCTGGAATGTCATTTGGTCTTCAAATGGTGCAATTAATCCTTGCTAATGTGTTGCATGGATTTGACATTGTAACGGTTGATGAGAAACCAGTTGATATGATTGAACGGGTTGGAATAACCAGCATTAAAGCTAATCCACTAAAAGTCATTCTTACACCACGTCTCTCTCGTAAAGCTTAA 1524 0.4409 MDLENLLSHPALFTMAVLLFSLFALSLFLSTRHGTRKAPPEAAGAWPLIGHLHLLGGPQPPHVTLGNMADKYGPIFTIRIGGRKKLLVVSNSKIAKECFTVNDKALAGRPKMVAFEVLGYDYAIFSFKSYGPYWRSLRKTAILEVLSDHKIHMNSHVMLSEVKTAMKDSYNNKSMVVTEMDKWFGEISLNVLFRLVVGKRFSGQSEENERIRKALRDFFDLGASFVVGDAIPWLRWLDLDGGEKAMKKTAKELDEFMQNSLDEHKRSRNHGAERDYMDKLISTIDEGFDGGDVDTIIKATSLTLILAGTDTTTGTLVWALALLLNNRQVLNKAIHELDAHIGTNRTVEVTDLNNLVYLQAIVKETLRMHPPVVLNLPHESMNDCEVGGYHIPAGTQLWTNIWKIQRDPALYPNPLEFQPERFLETHKDVDLRGQHFELIPFGAGRRICPGMSFGLQMVQLILANVLHGFDIVTVDEKPVDMIERVGITSIKANPLKVILTPRLSRKA 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271952g00032 507 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00032 507 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00032 507 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00032 507 PANTHER CYTOCHROME P450 82C3-RELATED 18 506 - -
Stsc271952g00032 507 Pfam Cytochrome P450 44 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00032 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Stsc271952g00032 507 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00032 507 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00032 507 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00032 507 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00032 507 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00032 507 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00032 507 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00032 507 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00032 507 FunFam Cytochrome P450 82C4 30 500 - -
Stsc271952g00032 507 SUPERFAMILY Cytochrome P450 44 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00032 507 Gene3D Cytochrome P450 30 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271952g00032 Stsc-Chr271952 114780 117016 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271952g00032 11 506 Cytochrome P450 AT4G31940 43.738 2.07e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271952g00032 - - gmx:100787630 649.047