Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271952g00031 ATGAAGAAGTGGTTTGGGGAGTTGATCCTCAACATGACTCTTAGAGCGGTTGCAGGGAAGAGATACTTGGGTGGAAGCGACGGCGGTTCTGATGAGGAAGGACGGCGGTATTTGAAAGCGTTGAGGGAATTCGTGCAGCAACTGGGGAAGATGTTAGCGGGCGATGCCGTGCCATGGCTTCGGTGGGTGGACTTGGGTGGACACGAGAAAGCCATGAAAGAAACCGCTAAGGAATTGGACGCCATGTGCGATAAGTGGTTAGAAGAGCATCGAGAGAAAAGGGTTTTAGAAGGAGATGATGGAAGGAGTCAAGATTTCATTGACGTAATGCTTTCGGTTCTTGATGGTACTGATGAGATTGCAGGATATGATGCGGATACCATCATCAAAGCTACAGTGCTGATCTTAACTGCAGGAGCTGTTGACACAAGCACAGTAAGCCTTACATGGATAATATCTTGTTTGCTAAATAACACTGCTAGTTTGGAAGAAGCACAAAAGGAGTTGGATCTCCAAGTTGGGAAAGAAAGATACTTAAAAGAATCAGACATAAGTAACTTAGTTTACATTCAAGCCATAGTTAAAGAAACATTAAGATTACACCCTCCATCAACTCTTTCTGGACTCCGTGTGTTTACAGAGGACTGCACTATTGATGGCTACTACATTCCAAAAGGAACACCGCTAATGACAAATTTGTGGAAGATTCACAGAGATCCAAACATTTGGTTGGACCCACTTGACTTTAAACCGGAGAGGTTTCTTACCGGTAACCACAAAAATGTTGATGTGAGAGGTAATCACTTTGAGCTGATCCCGTTTGGGAGTGGGAGAAGAATCTGCCCCGGGATATCTTTTGCAATGCCTTTGATTCATCTTACTCTGGCTACTTTCTTGCAATCCTTTGAAATTTCAAAGCCATCTCATGAACCCATTGATATGACTGAAAAATTTGGCCTAACAACCACCAAGGCTACTCCTCTTGTTGTGCTCATCAAACCACGTCTTTTTCCCAAGCTTTACCAAGACTTACCCTAA 1038 0.4374 MKKWFGELILNMTLRAVAGKRYLGGSDGGSDEEGRRYLKALREFVQQLGKMLAGDAVPWLRWVDLGGHEKAMKETAKELDAMCDKWLEEHREKRVLEGDDGRSQDFIDVMLSVLDGTDEIAGYDADTIIKATVLILTAGAVDTSTVSLTWIISCLLNNTASLEEAQKELDLQVGKERYLKESDISNLVYIQAIVKETLRLHPPSTLSGLRVFTEDCTIDGYYIPKGTPLMTNLWKIHRDPNIWLDPLDFKPERFLTGNHKNVDVRGNHFELIPFGSGRRICPGISFAMPLIHLTLATFLQSFEISKPSHEPIDMTEKFGLTTTKATPLVVLIKPRLFPKLYQDLP 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271952g00031 345 PRINTS E-class P450 group I signature 281 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00031 345 PRINTS E-class P450 group I signature 128 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00031 345 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00031 345 PRINTS E-class P450 group I signature 232 256 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00031 345 PRINTS E-class P450 group I signature 271 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00031 345 PRINTS E-class P450 group I signature 148 174 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00031 345 Gene3D Cytochrome P450 1 334 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00031 345 PANTHER CYTOCHROME P450 82C3-RELATED 1 341 - -
Stsc271952g00031 345 FunFam Uncharacterized protein 72 337 - -
Stsc271952g00031 345 Pfam Cytochrome P450 30 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00031 345 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 274 283 IPR017972 GO:0005506|GO:0016705
Stsc271952g00031 345 PRINTS P450 superfamily signature 139 156 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00031 345 PRINTS P450 superfamily signature 281 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00031 345 PRINTS P450 superfamily signature 272 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00031 345 PRINTS P450 superfamily signature 192 203 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00031 345 SUPERFAMILY Cytochrome P450 1 335 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271952g00031 Stsc-Chr271952 105761 107724 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271952g00031 1 341 Cytochrome P450 AT4G31950 50.725 3.08e-121 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271952g00031 - - qsu:112023929 423.32