Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271952g00028 ATGGCTTCTGTGATGATAGCTCTCGTTTTTCTAATCTTATTACTTGTTCCGCTACTCTTTCTTTTCCGGAGCCGCCGAGGAGCCAAAGAGCCGCCGTTAGCGGCGGGAGCATGGCCCATAATAGGCCATCTCTGGCTCTTCACTGGCTCCCAACCACCACAGATAACTCTAGGCGCCATGGCGGACAAATACGGAGCCATATTCAGAATCAAGATCGGATCACAACGTGCTGTGGTCATCAACAACTGGGAAACCGCTAAGGAATGCTTCACCACCAACGACGTCGCCCTGTTATCACGGCCAAGGGTGGTCGCCGTCGAACACCTTACCTATAACCAAGCCATATTGTCCTTCGCACCTTACGGCCATTATTGGCGCGAGATGCGAAGGATTGCCAACCAGGAACTGCTCTCCACTCGCCGAATCGAGTTATCAAGCCACCTTCGTGTCTCTGAGTTAGAATCCAGCATTAAAGCGCTCTACAAACTCTGGGCCGAGAAACACAACAACGAAAACGAAAACTCGGGGTATGTAGCGGTGGAGATGAAGAAGTGGTTTGGAGAGTTGATGCTCAATATAGTTCTTAGAGTGGTTGCGGGAAAGCGTTTTTTTGTTGGTGGTTCTGATGAGGAGGAAGCAGAGCGGTTCTTGAAAACCATGAGAGAATTCATGCGGCAGTTGGGGTTGTTTGTGGTGGGTGACGCTGTTCCCTGGCTTCGGTGGATGGATTTGGGTGGCCATGAGAAAGCCATGAAAGAGACTGCTAAGGAGATGGACGCCATTATGGTGGAGTGGTTAGAGGAGCATCGCCGGAAAAGAGCTAATTCTGATCATCAGGATGCTGGTGGGGATCAAGACTTCATGGATGTCATGCTCTCAATTATTGATGGTACTCAACTTGGTGGATTTGATTCCGATACCATCGTCAAAGCCACCACTTGGATTCTGATGGGAGGATCAATTGACACAGCTTCGGCAACTCTAGTATGGATAATATCATGTATGTTGAACAATAAAGCCACTATAGAACAAGCACAAACAGAGTTGGACATCCATGTTGGTAGAGAAAGAATTGTAAAAGAAACCGACATAAGTAAATTGGTATACATTCAAGCCATCGTTAAAGAGACACTAAGGCTATATCCTACAGCAATTTTTTCAGGTCCTCGTGAGTTCTCAGATGATTGCTTTGTTAATGGCTACTATATTCCAAAGGGAACTCAACTAATCACAAATTTATGGAAGATTCACACGGATCCTAGCATTTGGTCTGACCCATTGGAGTTTAAGCCAGAGAGGTTCCTTACCACTCATAAAGATGTTGATGTGAGAGGTAACCACTTTGAGTTAATGCCGTTTGGAAGTGGGAGAAGAATGTGTCCCGGTTTATCATTTGCCCTTCCCATGATTCATCTAACTGTGGCTACTTTCCTGCAATGCTTTGAAATTTCAAAGCCATCTGATGAACCCATTGATATGACTGAAATCTTTGGGCTCACAACCATGAAAGCTACTCCACTTGATGTTCTCATCAAGCCACGTCTTTCTTCTAGGCTTTATGGTTTATCGTGA 1572 0.4587 MASVMIALVFLILLLVPLLFLFRSRRGAKEPPLAAGAWPIIGHLWLFTGSQPPQITLGAMADKYGAIFRIKIGSQRAVVINNWETAKECFTTNDVALLSRPRVVAVEHLTYNQAILSFAPYGHYWREMRRIANQELLSTRRIELSSHLRVSELESSIKALYKLWAEKHNNENENSGYVAVEMKKWFGELMLNIVLRVVAGKRFFVGGSDEEEAERFLKTMREFMRQLGLFVVGDAVPWLRWMDLGGHEKAMKETAKEMDAIMVEWLEEHRRKRANSDHQDAGGDQDFMDVMLSIIDGTQLGGFDSDTIVKATTWILMGGSIDTASATLVWIISCMLNNKATIEQAQTELDIHVGRERIVKETDISKLVYIQAIVKETLRLYPTAIFSGPREFSDDCFVNGYYIPKGTQLITNLWKIHTDPSIWSDPLEFKPERFLTTHKDVDVRGNHFELMPFGSGRRMCPGLSFALPMIHLTVATFLQCFEISKPSDEPIDMTEIFGLTTMKATPLDVLIKPRLSSRLYGLS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271952g00028 523 FunFam Cytochrome P450 82C4 22 512 - -
Stsc271952g00028 523 SUPERFAMILY Cytochrome P450 37 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00028 523 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00028 523 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00028 523 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00028 523 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00028 523 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00028 523 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00028 523 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00028 523 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00028 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Stsc271952g00028 523 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00028 523 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00028 523 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00028 523 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00028 523 PANTHER CYTOCHROME P450 82C3-RELATED 9 520 - -
Stsc271952g00028 523 CDD CYP82 65 514 - -
Stsc271952g00028 523 Pfam Cytochrome P450 35 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00028 523 Gene3D Cytochrome P450 22 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271952g00028 Stsc-Chr271952 99571 101366 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271952g00028 1 520 Cytochrome P450 AT4G31940 47.358 1.37e-173 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271952g00028 - - qsu:112023929 641.343