Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271952g00027 ATGGTGATGATTGAGTATCAAGAAGCAGCAGTAGCAGCAGTTGTTGGCATACTAATCATATCATACTATTTATACTTCATCAAAACCTCACGTGACCATGCTCACAGGCCACAACCACCGCCTGAGGCAGCAGGTGGCTGGCCACTAATCGGCCACCTGAAAATCTTTAGTTCCGATCAGCCACCTTATGTTACCCTAGGAGACATGGCAGACAAGTACGGACCAATATTCAGAATAAGAATCGGCGTGCACCCTGCCATAGTTGTGAGTTCTTCAGAGCTAGCCAAAGAGTTATTCACCACGCATGATGTCATAGTTTCTTCTCGTCCAAAATATACAGCCGCCAAAATTCTGGGGCATAACTATGCCAATTTCGGTTTCGGTCCCTACGGCAATTACTGTCGCGAGATGCGAAAGATAACGGCGTCGGAGTTACTTTCCACTCGGCGGTTCGAGTTGCTTCGCGACATCAGAGATTCAGAGGTGGAGTTGTCCATGAAAGAGATATACAGAAGGTGGTTGGAGGAAAGAGAAGGTTCTAGAGGGTTGTTATTATTGGAGATGAAGAAGTGGTTGGGAGATATGAACCTGAACGTGATTCTGAGGATGGTTGCGGGGAAGAGATACTCGTGGAAAGGCGGCGATGAGCAGCAGGTGAGGCGGATCAGGTGGGCGTTCAGGGAATTCTTTCGGCTTACCGGAGTGGTGGTGATTGGGGATGCGATTCCTGCTCTTGGGTGGGTTGACTTTGGTGGTAAAATAAAGGAGATGGAGAAGGCAGCTAATGAAATGGATGAGATAGTAAGTGAGTGGATTGAAGAACACAAAGAGAACAGAGACTCTGGTGTGAGAAAATCAGAACAGGATTTTATTGATGTGTTGCTTTCTGTCCTTGATGGGGTTGATCTTGCTGGCCATGATACTGACACTGTCAACAAAGCTACTTGCTTGACACTAATTGCAGGGGCAACAGACACAACAACAGTTACAATGACATGGACACTTTCATTATTACTGAACCATGGCCACGTTCTGAAGAAAGTTCAAGATGAACTAGACGAGAAAGTAGGCAAGGAGAGACTAGTGAAGGAATCAGATATGAACAAACTAACATACCTTGAAGCAGTGGTGAAAGAATCAATGAGATTGTACCCGGCTGGGCCACTATCAGGGCTTCGTATATTCACAGAGGACTGTACCTTAGGGGGTTACCATATCAAACAAGGTACAAGATTGTTCTTGAATCTTTGGAAGCTTCACAGAGATCCTCACATATGGTCGGATCCATTGGAATTCAAGCCAGAGAGATTTCTAAGCACACACAAGGATGTGGATGTGAAGGGTCAGAATTTCGAGCTTCTTCCGTTTGGCGGCGGAAGAAGGTCGTGTCCTGGCATAACATTTGGGCTTCAAATGACGAAATTGGCATTGGCTGCATTCTTGCATGCATTTGAGGTGAAAACTCCCTCCAACGATCCTGTTGATATGAGTGCTACCTTTGGACTCACAATCATTAAAACCACACCGCTTGAGGTTTTTGCCAAACCTCGTTTATCACCTTCTGTCTATCATTGA 1575 0.4565 MVMIEYQEAAVAAVVGILIISYYLYFIKTSRDHAHRPQPPPEAAGGWPLIGHLKIFSSDQPPYVTLGDMADKYGPIFRIRIGVHPAIVVSSSELAKELFTTHDVIVSSRPKYTAAKILGHNYANFGFGPYGNYCREMRKITASELLSTRRFELLRDIRDSEVELSMKEIYRRWLEEREGSRGLLLLEMKKWLGDMNLNVILRMVAGKRYSWKGGDEQQVRRIRWAFREFFRLTGVVVIGDAIPALGWVDFGGKIKEMEKAANEMDEIVSEWIEEHKENRDSGVRKSEQDFIDVLLSVLDGVDLAGHDTDTVNKATCLTLIAGATDTTTVTMTWTLSLLLNHGHVLKKVQDELDEKVGKERLVKESDMNKLTYLEAVVKESMRLYPAGPLSGLRIFTEDCTLGGYHIKQGTRLFLNLWKLHRDPHIWSDPLEFKPERFLSTHKDVDVKGQNFELLPFGGGRRSCPGITFGLQMTKLALAAFLHAFEVKTPSNDPVDMSATFGLTIIKTTPLEVFAKPRLSPSVYH 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271952g00027 524 Coils Coil 254 274 - -
Stsc271952g00027 524 Pfam Cytochrome P450 44 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00027 524 PANTHER CYTOCHROME P450 82C3-RELATED 16 523 - -
Stsc271952g00027 524 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00027 524 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00027 524 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00027 524 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00027 524 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00027 524 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00027 524 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00027 524 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00027 524 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00027 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Stsc271952g00027 524 SUPERFAMILY Cytochrome P450 45 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00027 524 FunFam Cytochrome P450 82C4 30 515 - -
Stsc271952g00027 524 CDD CYP82 74 517 - -
Stsc271952g00027 524 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00027 524 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00027 524 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00027 524 Gene3D Cytochrome P450 33 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271952g00027 Stsc-Chr271952 96886 99237 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271952g00027 41 523 Cytochrome P450 AT4G31940 47.262 5.31e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271952g00027 - - adu:107460439 768.844