Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271952g00026 ATGATCCACGCCATTGTAGCCGCAGTTACCTGCATAATAATAATTTCTTACTACTTCACCAAGAGGGCAACACCACGTGATGACCGCCGCAAGCCACCCATGGCAGCTGGTGGGTGGCCGTTGATCGGTCATCTTCATCTCCTAGGTAGTTCAGGCGGGAAGCCACCCTGCGTGACCCTGGGAGACTTAGCAGACAAGTACGGAGCAATATTCAGCATCCGAATCGGTGTTCACGCTGCCGTGGTTGTGAGTTCTTGGGAGCTAGCCAAGGAGTGTTTCACCACCCTCGATGTCATTGTCTCCTCTCGTCCCAAGTTCACTGCCGCAAAGATTCTAGCACACGACTATGTCAATTTCGGGTTCGCTCCTTATGGTGATTTCTGGCGCGAGATGCGTAAGATAACCTCTTCAGAGTTACTCTCCCCTCGTCGCTTCGAGATGCTTCGAGGCGTTAGAGATTCAGAGGTGGAGGCTTCCGTGAAAGAGGTGTACAGAAAATGTGTAGAGAAAAGAGATGATGATGATTTGTTGGTGGAGATGAAGAAGTGGCTGGGGGATTTGAACCTCAACGTTGTTCTGAGGATGGTTGCGGGGAAGAGATACAGGGCAAGAAGTGAAGATGAGGAGAGAGAAGTGCGGAGGATTAGGATGGCGCTCAGGGAGTTCTTTCGCCTGATGGGTGTGGTTGTGATTGGGGACGCCATTCCTGGTCTTGGGTGGCTTGATCTTGGTGGCCAAGTCAAGGAGATGAAGAAAACCGCTAAAGAGATGGACGAGATCGTTTCCGAGTGGTTGGAAGAACATCGTAGAAGAAGAAGAAGAGACTCTGGCGATGAGAGTGAGACCACAATAGAACAAGATTTTATTGACATCCTGCTTTCTGTTCTTGACAGCAGCTCTCATCTTAACGGTTATGATCTTGACACTGTCAACAAAGCCACTTGTTTGATGATAAATTCAGCGGCAACAGATACAACAACAGTTACCATGACATGGACACTCTCATTACTCCTAAATCATCGCCACATTCTAAAGAAAGTTCAAGAGGAGCTAGACGAGAAGGTAGGAAAAGGGAGAGTGGTAAATGAATCAGATATTAAGAAACTAACATACTTTGAAGCTGTGGTGAAAGAATCAATGAGATTGTACCCAGCTGGACCACTATCTGGACCTCGTGAATTCAGAGAGGATTGTAGCTTAGGGGGCTACCATATCAAATCAGGTACAAGAATGTACTTAAACCTTTGGAAGCTTCAGAGAGACCCTCGCGTATGGTCAGATCCAATGGAATTTAAGCCAGAGAGGTTTCTAAGCACACACAAGGATGTGGATGTGAAGGGTCAGCACTTCNNNNNNNNNNTGGCGGACGAAGGGTGTGTCCCGGTGTGCCATTTGGGCTTCAAATGA 1407 0.4748 MIHAIVAAVTCIIIISYYFTKRATPRDDRRKPPMAAGGWPLIGHLHLLGSSGGKPPCVTLGDLADKYGAIFSIRIGVHAAVVVSSWELAKECFTTLDVIVSSRPKFTAAKILAHDYVNFGFAPYGDFWREMRKITSSELLSPRRFEMLRGVRDSEVEASVKEVYRKCVEKRDDDDLLVEMKKWLGDLNLNVVLRMVAGKRYRARSEDEEREVRRIRMALREFFRLMGVVVIGDAIPGLGWLDLGGQVKEMKKTAKEMDEIVSEWLEEHRRRRRRDSGDESETTIEQDFIDILLSVLDSSSHLNGYDLDTVNKATCLMINSAATDTTTVTMTWTLSLLLNHRHILKKVQEELDEKVGKGRVVNESDIKKLTYFEAVVKESMRLYPAGPLSGPREFREDCSLGGYHIKSGTRMYLNLWKLQRDPRVWSDPMEFKPERFLSTHKDVDVKGQHFXXXXADEGCVPVCHLGFK 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271952g00026 468 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00026 468 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00026 468 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00026 468 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00026 468 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00026 468 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00026 468 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00026 468 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00026 468 FunFam Cytochrome P450 82C4 22 454 - -
Stsc271952g00026 468 SUPERFAMILY Cytochrome P450 38 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00026 468 Pfam Cytochrome P450 38 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00026 468 Gene3D Cytochrome P450 26 452 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00026 468 PANTHER CYTOCHROME P450 82C3-RELATED 10 451 - -
Stsc271952g00026 468 Coils Coil 247 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271952g00026 Stsc-Chr271952 94647 96554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271952g00026 33 467 Cytochrome P450 AT4G31940 45.154 1.44e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271952g00026 - - gmx:100810391 586.26