Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271952g00025 ATGGAAACATTATATATATATTATGTTATGCAGGCACTTATACTTGGTGGGAGTGATACCACAGCAGGGACACTAACTTGGGCAATGTCTTTACTCCTCAACAATCCTCCTGCATTAAGAAAGGCACAAGAAGAATTGGACCTGCATGTTGGTAAGGAAAGGCAAGTTGAGGAATCAGACATTAGAAATCTTAAATATATTGAAGCCATTATTAAGGAAACTCTGAGGCTCTACCCAGCAGGTCCACTCCTGGGACCAAGGGAAGCCCAAGAAGATTGCAACGTTGCTGGTTATCATGTGCCAGCTGGCACACGCTTGGTGGTTAACTTGTGGAAGATTCATAGGGATCCAAGGGTTTGGGAAGACCCTGACTCATTTCAACCGGAGAGGTTTCTCTCAGGCCATCATGCTGCTGCTATTGATATTAGAGGCCAAAACTTTGAACTTATTCCTTTTGGATCTGGGAGAAGGTCATGCCCTGGCATGTCCTTTGCGCTCCAAGTTCTTCACTTGACGCTTGCTCGTCTGCTTCATGCATTTGATTTTGCAACTTTGTCCAACGAGCCTGTTGATATGAGTGAGAGTCCAGGTTTAACCATTCCTAAGGCAACTCCACTGGAGATTCTGATTACTCCCCGTCTTCAACCACAACTCTATGCCTAG 663 0.4495 METLYIYYVMQALILGGSDTTAGTLTWAMSLLLNNPPALRKAQEELDLHVGKERQVEESDIRNLKYIEAIIKETLRLYPAGPLLGPREAQEDCNVAGYHVPAGTRLVVNLWKIHRDPRVWEDPDSFQPERFLSGHHAAAIDIRGQNFELIPFGSGRRSCPGMSFALQVLHLTLARLLHAFDFATLSNEPVDMSESPGLTIPKATPLEILITPRLQPQLYA 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271952g00025 220 PRINTS E-class P450 group I signature 25 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00025 220 PRINTS E-class P450 group I signature 159 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00025 220 PRINTS E-class P450 group I signature 68 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00025 220 PRINTS E-class P450 group I signature 109 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00025 220 PRINTS E-class P450 group I signature 149 159 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00025 220 PRINTS E-class P450 group I signature 5 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00025 220 PRINTS P450 superfamily signature 16 33 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00025 220 PRINTS P450 superfamily signature 69 80 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00025 220 PRINTS P450 superfamily signature 159 170 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00025 220 PRINTS P450 superfamily signature 150 159 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00025 220 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 152 161 IPR017972 GO:0005506|GO:0016705
Stsc271952g00025 220 FunFam Uncharacterized protein 3 215 - -
Stsc271952g00025 220 Pfam Cytochrome P450 12 202 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00025 220 SUPERFAMILY Cytochrome P450 5 213 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00025 220 Gene3D Cytochrome P450 1 216 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271952g00025 220 PANTHER CYTOCHROME P450 82C3-RELATED 9 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271952g00025 Stsc-Chr271952 93378 94232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271952g00025 12 220 Cytochrome P450 AT4G31940 70.335 2.17e-110 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271952g00025 K23136 - gmx:100811993 362.073