Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271951g00013 ATGCAGCAGCAAGACCCGAACGCTGCCTCCTCCTCGGAGCCACGTGGACCTCGGCGCAAGAGACAACGTACAAGCCGTCGTCGAGGTCGACCAGTCACCACACAACGATACCCGCCGCTGGGGCCGGACGAAGACAGAGGTTACTTCCAATTCTACTCTCACCTTGGTGTTCACGAGGAGATGCTCAAGGATCAAGTGCGTACCAGTACTTATAGGAAAGCAATCATGTATCATCAGGCTTCTATTGAAGGCAAGGTTGTACTGGATGTTGGATGCGGTACAGGCATTCTTGCTATCTTTTGTGCTCAGGCTGGTGCAAGGAAGGTGTATGCAGTTGAAGCCTGCGAATTTGCTGGACTGGTGAACAGTGTAGTTGAAGAAAATCAGCTTTCAGATATTATCGATGTATTGCATGGCCGAGTCGAGGAGGTTGAAATCCCTGAGCAGGTGGATGTTATAGTTTCAGAATGGATGGGCTATATGCTTGTATTTGAGAGCATGCTTGCAAGCGTTATCGCTGCTAGAGATCGCTGGCTCAAACAAGATGGCCTAATTCTTCCTTCAAGTGCACTGTTGTACATGGCTCCTATCACTAATCCTGAACGATACAGCGAGACCGTTGACTTCTGGCGTGATGTTCATGGAATTGATATGTCTGTGATTAGACCATACGCAAAACAGTGTGCATTTCAAGATCCTTGGGTGGAGACAATCACACCTGCAAATATTTTGGCATGGCCTCATCTGGTGACATGTATCAACTGTCACACTATCACCATTCCTGAGCTAGACTCATTTCAAACATCTTTTAACATGAGATCAGTGAGGAAAGCTCCCCTACATGGTTTTGCATTTTGGTTTGATGTTGACTTTACTGGGAAAAACGAACCAACTTATAGTCCTATAAGGTCAACGCAAGCAACAAGTATTCTTGTGACTCCGCCTGAAAGAACCCAACCTCCACCAAATTGGGAACAGGTGAAAGAGATTGTCTCAACAGAAGCTGCTTTGGAACTGTTGGATCTTCCCCTACCCCCTTCAGGTGGTGGCCACAATATTCCACCACCAGTTCTCTCCACTGCTCCTAATGAACCCCCAACACACTGGGAACAGACCATGCTTTACTTTTATGATCCAGTGGAGGTGGAAAACAATCAACCCATTGAAGGCACACTCACATTGTCACAAAACCCAACAAATAAACGCTTCTTGGATATTCGGCTTGAGTTAATTTTAGGGGGTCTAATCTTGAAGAAAGAGACCACTTTGAGATGA 1275 0.4635 MQQQDPNAASSSEPRGPRRKRQRTSRRRGRPVTTQRYPPLGPDEDRGYFQFYSHLGVHEEMLKDQVRTSTYRKAIMYHQASIEGKVVLDVGCGTGILAIFCAQAGARKVYAVEACEFAGLVNSVVEENQLSDIIDVLHGRVEEVEIPEQVDVIVSEWMGYMLVFESMLASVIAARDRWLKQDGLILPSSALLYMAPITNPERYSETVDFWRDVHGIDMSVIRPYAKQCAFQDPWVETITPANILAWPHLVTCINCHTITIPELDSFQTSFNMRSVRKAPLHGFAFWFDVDFTGKNEPTYSPIRSTQATSILVTPPERTQPPPNWEQVKEIVSTEAALELLDLPLPPSGGGHNIPPPVLSTAPNEPPTHWEQTMLYFYDPVEVENNQPIEGTLTLSQNPTNKRFLDIRLELILGGLILKKETTLR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271951g00013 424 FunFam Protein arginine N-methyltransferase 6 42 187 - -
Stsc271951g00013 424 Pfam Ribosomal protein L11 methyltransferase (PrmA) 82 162 - -
Stsc271951g00013 424 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 51 410 IPR029063 -
Stsc271951g00013 424 Gene3D Vaccinia Virus protein VP39 42 187 IPR029063 -
Stsc271951g00013 424 Gene3D - 189 415 - -
Stsc271951g00013 424 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 45 424 IPR025799 GO:0016274|GO:0018216
Stsc271951g00013 424 MobiDBLite consensus disorder prediction 1 45 - -
Stsc271951g00013 424 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 26 410 IPR025799 GO:0016274|GO:0018216
Stsc271951g00013 424 CDD AdoMet_MTases 87 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271951g00013 Stsc-Chr271951 58331 61733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271951g00013 45 326 C2H2 Transcription Factor Family AT3G12270 38.000 4.75e-55 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271951g00013 K11437 - mnt:21405865 434.106