Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271950g00015 ATGGAGCAGTCTGGGGAAAATTGGCCTTCGGATGCTTTTGATTTGGAAATGGGGGCTGATAATAATGATAATTGTTATGATGAAGAAGAAGAGTTGGGTTGTGATGATGAGATTCAATATTTTGCTGAAGATCCCATTATGGATGAGACCCAAAGAAAGCAGAAACAAAGAGAGGAACTTCAAGAGAGATTGCTTGCACTTTCAGCCACCTTACCTATTGGTGACTTCAACGATAAGGAGATGGACGGCAAATCAATCCTAGAGAATGCGAGCAACTATGTGAAACAACTCCAACAACGCGTGAGGGAGTTAGAAGAAAATGTTGGTGGTGGATCCAACAGCAACGAGAACAATAGTTCTGGTGAATATTATTATTATGGAGAAGGTGGTGGCAATAATATTAGTATTATTCTTCCTGAGGTCAAAGCAAGAGTCTTGAAAAAGCAAGTGCTCATCATAATCCATTGTGAGAAACAAAAGGATTTGATGCTCAAAATACTAACAAAACTTGAAAATCTTCATCTCTCGGTTGTCAGTAACAGTGTCTTGCCATTTGGGAAATCAACCATCGACATAATAACCATTGTTGCTCAGATGGATGATAAATACAACATGACAGTGGATGGATTAGTGGAAAGCCTGAGATTAACTATCTTGACACAATAG 666 0.3889 MEQSGENWPSDAFDLEMGADNNDNCYDEEEELGCDDEIQYFAEDPIMDETQRKQKQREELQERLLALSATLPIGDFNDKEMDGKSILENASNYVKQLQQRVRELEENVGGGSNSNENNSSGEYYYYGEGGGNNISIILPEVKARVLKKQVLIIIHCEKQKDLMLKILTKLENLHLSVVSNSVLPFGKSTIDIITIVAQMDDKYNMTVDGLVESLRLTILTQ 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271950g00015 221 MobiDBLite consensus disorder prediction 1 28 - -
Stsc271950g00015 221 Coils Coil 87 114 - -
Stsc271950g00015 221 Coils Coil 50 70 - -
Stsc271950g00015 221 Gene3D - 47 110 IPR036638 GO:0046983
Stsc271950g00015 221 PANTHER BHLH TRANSCRIPTION FACTOR 42 219 - -
Stsc271950g00015 221 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 109 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271950g00015 Stsc-Chr271950 98879 105175 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271950g00015 54 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 34.946 5.01e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271950g00015 - - aip:107616596 256.529