Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271948g00009 ATGGCAGATGAAGATCACACCCCATCAGAAGCAAAAGATTACTATTCCAAATCAATATGGTGGTCAAAAACTCCCAAGAGAAGTGAAAGAAACAATAATAATAATGGAGTTAATGGTTTCTATTTTAGTGCTATCAATGATTACTATGGCTTTAACTCCCAAGAAATAGTGACTCCTCAAGTATCTGACTCATTTGAAGGGAACAGGGTTTTGAATAACAGTGCTAGAAATAATGGAGTTGACAATAATGGAACCTTCGCGGCCTGCGGCGGCGAAGAGAATGGTGAGTACGACCGGTATTCGATGGTGTCGTTGTCGACGGAAATTGTGGAGATAGTTGAAGATGGCAAGAGCATAACAAGCAACAAGGATAGAAGAGATGATGACATTTATGTTGCTGTTGGCAAAGATGACATGGATTTGGTGCAATGGGTTCTTGATCATGTTGGTTCTTCTCGTGCTCGGATTTTTCTTGTCCATGTATCGCCGCCGATTACAATGATTCCCACGCCAGTTGGGAAGTTTGATAGAAGCCAATTAACCCCGCAACAAGTTAGATTTTACGTGAATCAAGTGAATAGCAAGAGGAAGGAACTTTTGCAGAAATACATCCAGCTCATCAATGAAGCCAAGTTAACTGCTGAAACGTTGCTTCTAGAGAGCAATGACACAGGGAAAGCCATTCTGGACCTCATCTCTATACTAAACATATCCAACATGATCATAGGAATGAAAAAGCTACCCTACACAAGGAACAGGCGCAGCAACAAATTGAGCAAAGGAGAATTTGTAAAGAAAAATGCACCAATGTCATGTGAAGTTACCTTGGTTTGTCATGGTGAGGAGTTTATAGCTACCCCTTACATGGATCAATTTGCATCCAAAGGCCAAGTGCCAATGCCAATGGCAGTGTCCCAAAGTAAAGGTCACTCAAAAAGCTACTTCTTTCCCTGTGCATGCCTTTTTACAGGCAAGTGTACTTAA 984 0.4126 MADEDHTPSEAKDYYSKSIWWSKTPKRSERNNNNNGVNGFYFSAINDYYGFNSQEIVTPQVSDSFEGNRVLNNSARNNGVDNNGTFAACGGEENGEYDRYSMVSLSTEIVEIVEDGKSITSNKDRRDDDIYVAVGKDDMDLVQWVLDHVGSSRARIFLVHVSPPITMIPTPVGKFDRSQLTPQQVRFYVNQVNSKRKELLQKYIQLINEAKLTAETLLLESNDTGKAILDLISILNISNMIIGMKKLPYTRNRRSNKLSKGEFVKKNAPMSCEVTLVCHGEEFIATPYMDQFASKGQVPMPMAVSQSKGHSKSYFFPCACLFTGKCT 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271948g00009 327 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 92 321 - -
Stsc271948g00009 327 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 138 248 - -
Stsc271948g00009 327 Coils Coil 189 209 - -
Stsc271948g00009 327 Gene3D HUPs 124 251 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271948g00009 Stsc-Chr271948 50808 52311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271948g00009 127 280 U-box Gene Family AT2G45910 28.481 2.39e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271948g00009 - - pvu:PHAVU_003G204300g 370.933