Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271942g00023 ATGATGAGTAGTAATAGCAGGTCGCCATTCACAGTGTCTCAGTGGCAGGAACTTGAGCATCAAGCTCTGATTTACAAGTACATGGTGGCTGGTCTTCCTGTTCCTCCTGATCTTGTTATCCCCATTCAGAAGAGCTTTGACTCCATTTCCCATTCCTTCTTCCACCACCCTGCTTTGAGTTATTGTTCTTTCTACGGGAAGAAGGTGGACCCGGAGCCAGGTCGATGCAGGAGGACTGATGGGAAAAAGTGGAGGTGCTCTAAGGAAGCATACCCAGACTCCAAGTACTGTGAGCGACACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAATCTACGACACAGTCATCATCCACTGTGACATCACTGACTGCTACAACTGGTGGCACCAGTGGAACTGGAAATTACCAGAGCCTTAACACAATTAGCTTTGCTAATCCCCAAGGTACTACTGGTTCTGGAGCTGAACAAACACACTATCATTTGGATTCGATACCCTATGGGATTCCAAGCAGAGAATACAGGTATCTTCAAGGAAACAAATCAGAGGGTGGTGAACCGAGTTTATTTTCCAAAGCTTTAGGAAGCAACAAGGAACTTCGGATGGAAACGCAGCTGGAAAACACATTGATGCCAACCAGAGTTGCCTCCTTCTCAACATCAAGATCAAACAACAATTCCATTTTGCCAGGAGATTATCTGCAGAATTCATATTTATCCGATGAACATGCCTCGGGTGAATCTGTGAAGCATGAGGGTCAGTCTCTTCGACCTTTCTTTGATGAATGGCCTAGGAGCAGGGATTCATGGTCTGGTCTGGAAGCAACTCAGCTATCCATGTCCATTCCAATGTCAGCTTCGAACTTCTCTACAGCCAGCTCACAATCCACGCATGGTGAGGCTAAATAA 921 0.4658 MMSSNSRSPFTVSQWQELEHQALIYKYMVAGLPVPPDLVIPIQKSFDSISHSFFHHPALSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQSTTQSSSTVTSLTATTGGTSGTGNYQSLNTISFANPQGTTGSGAEQTHYHLDSIPYGIPSREYRYLQGNKSEGGEPSLFSKALGSNKELRMETQLENTLMPTRVASFSTSRSNNNSILPGDYLQNSYLSDEHASGESVKHEGQSLRPFFDEWPRSRDSWSGLEATQLSMSIPMSASNFSTASSQSTHGEAK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271942g00023 306 MobiDBLite consensus disorder prediction 286 306 - -
Stsc271942g00023 306 MobiDBLite consensus disorder prediction 97 138 - -
Stsc271942g00023 306 Pfam QLQ 9 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Stsc271942g00023 306 PANTHER GROWTH-REGULATING FACTOR 5 8 292 IPR031137 GO:0005634|GO:0006351|GO:0032502
Stsc271942g00023 306 Pfam WRC 71 113 IPR014977 -
Stsc271942g00023 306 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Stsc271942g00023 306 ProSiteProfiles WRC domain profile. 70 114 IPR014977 -
Stsc271942g00023 306 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Stsc271942g00023 306 MobiDBLite consensus disorder prediction 111 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271942g00023 Stsc-Chr271942 121463 125026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271942g00023 7 113 GRF Transcription Factor Family AT3G13960 63.964 1.58e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Stsc271942g00023 WRC 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271942g00023 - - ahf:112749828 548.51