Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271942g00018 ATGCCAACAAAGATCATGGGAGATGAATTAGGTGCAGTTGGGGTGAGAGGTGTAAATGAAGAAGATGATTATGGTTATGGAGAGAATAATCATAATAACAAGAGTAATGAAGATGAAAACAAGTGGCCAGCATGGCTGAAACCACTTCTGAAAACAAGCTTCTTTGTTCAATGCAAAGTCCATGCTGATTCCCACAAAAGTGAATGCAACATGTATTGCTTGGATTGTATGAATGGAGCACTTTGTTCTGCTTGTCTGGCTTCTCACAGAGACCACAGAGCCATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTGTCTGAGATTCAGAAATTCATGGACATAACAGGAGTTCAGACATACATAATAAACAGTGCAAAGATTGTGTTCCTCAATGAGAGGCCTCAGCCAAGGCCTGGCAAAGGTGTCACCAACACTTGCCAAGGCTGTGATCGCAGCCTCCTTGATTCCTTCACCTTCTGCTCTCTTGGTTGTAAGATAGCTGGAACTACCAACAAGTTCCGGAAGAAGAAAAAGTTAGAAGATGGTGATTCTGATGGAGAAGAGTCAATGAATGGCAGTGGCAGAAACAGAATCCAGAGCTTCACACCATCAACGCCGCCACCGACAGCGGCTAATTACAGGACTGCTAAGAGGAGGAAGGGTGTCCCCCATAGATCTCCAATGGGGGGAGGACTAATCATAGAATACTAA 720 0.4403 MPTKIMGDELGAVGVRGVNEEDDYGYGENNHNNKSNEDENKWPAWLKPLLKTSFFVQCKVHADSHKSECNMYCLDCMNGALCSACLASHRDHRAIQIRRSSYHDVIRVSEIQKFMDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQGCDRSLLDSFTFCSLGCKIAGTTNKFRKKKKLEDGDSDGEESMNGSGRNRIQSFTPSTPPPTAANYRTAKRRKGVPHRSPMGGGLIIEY 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271942g00018 239 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 36 231 - -
Stsc271942g00018 239 MobiDBLite consensus disorder prediction 194 214 - -
Stsc271942g00018 239 CDD Bbox2 58 97 - -
Stsc271942g00018 239 MobiDBLite consensus disorder prediction 180 239 - -
Stsc271942g00018 239 Pfam PLATZ transcription factor 98 169 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271942g00018 Stsc-Chr271942 90409 92323 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Stsc271942g00018 PLATZ 5.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271942g00018 - - gmx:100796834 379.407