Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271942g00011 ATGGAAAACAGAAAAGTGTCTAGGAAGAGAGAAATAAAGTACAGGTCTATAAAACCCTCTGATCAACACACTTTACAGCGTCTCCATGATCAACTCTTTCCCATCAGGTATGAATCTAAATTCTACCAAGATGTGGCCAATGGGCGAGGCATCCAGTCGTGGGGAGCTGTCGACACGAGTCGCGGTGATGGTCAGAGTGATGAACTGATTGGGTTCGTGACGACTCGGATTGTTCCTGCCGGAGAAGTTGAGCTTAATTATGTTAATTATTTGAAGCATTTCATGAAAAAGATAGTGAGTATTCATGGACATAACTCAGCCAAATCAGATGAAACCTTAGTCCATGTTCTAACACTAGGAGTGGTGGAAGAATATAGACATCATGGAATAGCATCTCATCTTCTTAAGAAGGTGATTGAGGATGCTTCTAAGGTTCAAAGTTGCCGTGCTGTTTACTTGCATTCAAGTTGCGAGAACGAAGCAGCAGTTCATCTCTACAAGAAAATGTCTTTCAAGTTAGTAAGAAAGTTGCCAAAGTATTATTCATTCAATGGCACACATTCAGATGCATACTTGTTTGTTTACCCACTCAATGGCGCTCGCTTCCATCGCTGGCCATTTGAAGTTCTGATATCATCTTTGAGCTGCGCGAGGAGCGGCTTGGAGTCTTGGCGCACAAGAATGAAGACTGATACATCATCTCAAAGCAGGGAAAGTGGCATTACACAACAAAACAGAGGAAACTAA 747 0.423 MENRKVSRKREIKYRSIKPSDQHTLQRLHDQLFPIRYESKFYQDVANGRGIQSWGAVDTSRGDGQSDELIGFVTTRIVPAGEVELNYVNYLKHFMKKIVSIHGHNSAKSDETLVHVLTLGVVEEYRHHGIASHLLKKVIEDASKVQSCRAVYLHSSCENEAAVHLYKKMSFKLVRKLPKYYSFNGTHSDAYLFVYPLNGARFHRWPFEVLISSLSCARSGLESWRTRMKTDTSSQSRESGITQQNRGN 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271942g00011 248 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 198 IPR000182 GO:0016747
Stsc271942g00011 248 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 11 199 IPR016181 -
Stsc271942g00011 248 Gene3D - 5 200 - -
Stsc271942g00011 248 MobiDBLite consensus disorder prediction 227 248 - -
Stsc271942g00011 248 FunFam Histone acetyltransferase MCC1 isoform A 6 200 - -
Stsc271942g00011 248 Pfam Acetyltransferase (GNAT) family 62 171 IPR000182 GO:0016747
Stsc271942g00011 248 PANTHER N-ALPHA-ACETYLTRANSFERASE 60 2 231 IPR045141 GO:0004596
Stsc271942g00011 248 CDD NAT_SF 114 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271942g00011 Stsc-Chr271942 52485 54021 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc271942g00011 Acetyltransf_1 2.6e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271942g00011 K22767 - gmx:100794189 224.557