Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271942g00010 ATGGCAACAAACACAAAGGTGCACAATCAACCACCACCTTCACCACCTTCACCAACACTGCCAGAAATACGTTTCAGGCCGCTACGACTTTCAGACCTTGAGACTCTGGAGCTTATTCATGCCAAAATATTTCCCTACGGGTATAATGACGACCCTTCAGAAGTTTACAAACAAGTGTTATCATCAGAAGAAGAAGGTGATGAGTCTAGGAACACAATGACATTGGGAGCTGTTGACAGTAGTAGGCCAGATGATGAAAGAGATCAAATCATTGGATATGTAGTCACAACTAATGTTCTTGCAAGCCACAGTGAGATAGCGAATAATATAGTAGTTGGAGGTGAGCCATTATCAGAGAATTCAGAGAATGTGTTGGTTTATGTTATGTGGCTGGGAGTGTTGGAAGCCTATAGGAATCGAGGAATAGGGACATATTTGATGAGGAAGGTTATAAAGCATGCTTCGAGTATTCCAACATGCGTGGGCGTTTACCTGCACGCAGTTGCTGACAATAAGGCAGCAATTAAGTTGTATAAGAAGTTGTCCTTCAAGTGTGTGAGAAGGTTAAGGAACTATTATCCAATCAATGACAAGCTCTATGACGGATTATTATTCGTCCACTCTCTTAATGGTGCACGCTATCATCGCTCACCAAAAGATGTTGTGAACTTATTGTTAGGGCACGTGAGGAGTGGGTTGAAGTCTGTGAGTACTAGGCTGCGCAAGATTAAAGAAGAAAGGCTGCATAATCATTCATGA 759 0.4216 MATNTKVHNQPPPSPPSPTLPEIRFRPLRLSDLETLELIHAKIFPYGYNDDPSEVYKQVLSSEEEGDESRNTMTLGAVDSSRPDDERDQIIGYVVTTNVLASHSEIANNIVVGGEPLSENSENVLVYVMWLGVLEAYRNRGIGTYLMRKVIKHASSIPTCVGVYLHAVADNKAAIKLYKKLSFKCVRRLRNYYPINDKLYDGLLFVHSLNGARYHRSPKDVVNLLLGHVRSGLKSVSTRLRKIKEERLHNHS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271942g00010 252 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 11 193 IPR016181 -
Stsc271942g00010 252 MobiDBLite consensus disorder prediction 60 83 - -
Stsc271942g00010 252 PANTHER N-ALPHA-ACETYLTRANSFERASE 60 19 243 IPR045141 GO:0004596
Stsc271942g00010 252 Gene3D - 16 212 - -
Stsc271942g00010 252 MobiDBLite consensus disorder prediction 1 22 - -
Stsc271942g00010 252 Pfam Acetyltransferase (GNAT) family 85 183 IPR000182 GO:0016747
Stsc271942g00010 252 CDD NAT_SF 126 154 - -
Stsc271942g00010 252 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 206 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271942g00010 Stsc-Chr271942 50968 52314 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc271942g00010 Acetyltransf_1 3.5e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271942g00010 K22767 - gmx:100812509 190.66