Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271934g00022 ATGTATGAGCCCCTTCTAAGCCTCTTCTCCAGCAAAGGAGAAGAAGCACATTCACCAAGCACACAAACATCACATAATGAACAATGTCTCCATGATCATGTTCTTGCTGCTCCTTCACTGAGCCAATCCACGTCTTCTTACATAAACCTCGTAGCAAACTTGAGCATCAAGAAAAGGAAGATTGCCCATCGCTCACGTTCTGCACCGACCGTACTAGTCACCGACGCTGGCATAGACTTTGATGAGCCCTCTGAACCTATATCTATACAAAACGGCTTGGTCGAATACATCTGTGATGCTCAAGAAGCATTCACATTGAGTATGATTGATGAGAATAGATATGAGAGAATTCTCTGGACCTACATAGTTGATGAAGAGAAAGGAAGAATGCGGATTCGAACAAAAGTTTCTTTAGCTTTGGTTGTTGTCATTGGTTGCATCACAATAGGAGCAGTTACAGCTCACTTTCTTGAGGTTGGTTACCGCGATTATTCTTTCAAAACCGTAACCGGAAGATGCTTTGCGATCATATGGCTTTTGGTAAGTACATTGGCAGTTGCTAGGGCCTTTCTGTACCTCACTGATTATAGCATGCACAAGAGGAAACGCAAGATGGCGAAATTAGTTCTTCATAAGAAGATAACATTGTCAGATTTAGTAGCTGCAGACCTTGATAATGATGGATCAATAAGTCCTTTGATTTATGGCCATGAACAGCAGCAGCTACAGTCTGATGATGCTCTTAGAGCAACAAGAAGTGATGAGCCAAATCAGCAAGAGCTTCATTTGGACAACAATAAGATTTCTCATTTGGTCATGGACTCCTCTATCCACCCTGTAATTGGCTGGTTTGTTGAGCCCAGAGGGAGTAACATTTTCACAACATTATTTGTACGGAAGGTGTTCCGGTATATCTCAAATCAGCTAGTAGCTATCCCCGCCCTTACTCTGTCTTCTACTCTTCTCACAACCTCACCCAATCACCACCGCCGGCTACCCCCAGGCCCCGTTCGCCTTCCCAGTCGCCGAGCTTCCACCTTCCACCGACTAGCCTCTGCCTGTGACTTGCAGTCACCGTCGCGAGCTCCCGCTTTCCACCGTCGCCAGCTCCTTCCTTCCACCATCTGGGCATTTTTTATTTCTGTTGCTGGGGCGTATCAATTGTTGATGCACAAAGTCAGACTATTCTATGTGTATGGATCTCATCTCGATATTGACGTGAAGGACTTTAGAAATGCCAAACCCAATATTCTGTCGCGCTATGCTTCGAAAATTCCGAGAAACTTCAACAAAAATTATGAGCATGCACTTAAAACTCTCTGGAAAAAGAGAGGTCTCGATATTGAGGGAGCTTGCTTCATTGGAATTTATAGACTATGCACGGATGTCAGAGTTTTCAAAGGGACAAAAGGGACCAAGCACGTCAGAGTTTTGGACAAATGCAAAAGTTCAACTTTTGGATTATCTATAGAAGATTCAGATTTCCTACTTGAGTCATCTTCAGGTACTCAACTCTCTCCTGTTGAGACAGCGAGAACAGTTGTTGAGGCTCATAGAAGAGCTGCACTAGTGTTTCGTCCCCCCATGGACCAGATATTAGGCAATCGTATGAGTTTTCATATTTTAATAATTCTTCTGGAGAGATAG 1647 0.4378 MYEPLLSLFSSKGEEAHSPSTQTSHNEQCLHDHVLAAPSLSQSTSSYINLVANLSIKKRKIAHRSRSAPTVLVTDAGIDFDEPSEPISIQNGLVEYICDAQEAFTLSMIDENRYERILWTYIVDEEKGRMRIRTKVSLALVVVIGCITIGAVTAHFLEVGYRDYSFKTVTGRCFAIIWLLVSTLAVARAFLYLTDYSMHKRKRKMAKLVLHKKITLSDLVAADLDNDGSISPLIYGHEQQQLQSDDALRATRSDEPNQQELHLDNNKISHLVMDSSIHPVIGWFVEPRGSNIFTTLFVRKVFRYISNQLVAIPALTLSSTLLTTSPNHHRRLPPGPVRLPSRRASTFHRLASACDLQSPSRAPAFHRRQLLPSTIWAFFISVAGAYQLLMHKVRLFYVYGSHLDIDVKDFRNAKPNILSRYASKIPRNFNKNYEHALKTLWKKRGLDIEGACFIGIYRLCTDVRVFKGTKGTKHVRVLDKCKSSTFGLSIEDSDFLLESSSGTQLSPVETARTVVEAHRRAALVFRPPMDQILGNRMSFHILIILLER 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271934g00022 548 SUPERFAMILY Voltage-gated potassium channels 113 214 - -
Stsc271934g00022 548 Gene3D - 94 215 - -
Stsc271934g00022 548 PANTHER CREG1 PROTEIN 390 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271934g00022 Stsc-Chr271934 128991 139565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271934g00022 91 252 Ion Channels AT4G18160 43.548 3.50e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271934g00022 K05389 - gmx:100789639 218.779