Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271934g00011 ATGGCAGGAGAAGGGGAAGATAACGCAGAAGAATCAAACATAATAATCCCCATCACCATGCCACCATTTCACCACCACCGCAACAAGCCATCACCGCCATTGCATGTTTTACGGCGAGGCCGTAAGCGGCGGAGGGATGAAGAAGAAGAAGAAAAAGAAGAAGAAAGAGAAGAGGTAGAGAGAAAGATTGAAGCATTGAAGAAGATAGTGCCAGGTGGGGAATCAGTTGAAGGAGTAGAGAAGCTGTTTGATGAAACCGCAGGTTACATACTCTCTCTTCAGTGCCAACTAAACACTCTTAGGGCTCTTGCCACTCTCTTCAACAATCTCCACCATCAAAACACCAACCTTGGAGGTTAA 360 0.4611 MAGEGEDNAEESNIIIPITMPPFHHHRNKPSPPLHVLRRGRKRRRDEEEEEKEEEREEVERKIEALKKIVPGGESVEGVEKLFDETAGYILSLQCQLNTLRALATLFNNLHHQNTNLGG 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271934g00011 119 MobiDBLite consensus disorder prediction 41 59 - -
Stsc271934g00011 119 Coils Coil 37 69 - -
Stsc271934g00011 119 CDD bHLH_AtIBH1_like 65 104 IPR044549 GO:0006355
Stsc271934g00011 119 MobiDBLite consensus disorder prediction 1 59 - -
Stsc271934g00011 119 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 41 107 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271934g00011 Stsc-Chr271934 69584 69943 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271934g00011 26 118 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 31.250 5.96e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271934g00011 - - aip:107608265 133.265