Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271934g00008 ATGTTAATAGTCTCATTCAATTTCTTGTGGCGCAAGAAACGTAGCAACAGAGAAAAGAAGCAGCTCCCACCTGGGGACATGAAGTTCCCATTGATTGGTGAGACAATGGAGTTCTTCAATGCTCAGAGGAGGAACCAATTGTTCGAGGAATTCGTCCGGCCGCGAGTTCTAAAGCACGGAAAGATCTTCAAAACAAGGATAATGGGATCTCCAACTGTGATTGTGAATGGCTCTGAAGCAAACAAATTCTTTCTAACCAATGAGTTTAAGCTGGTGAAGAGTTCTTGGCCTTCTTCCTCTGTTCAGCTCATGGGAACCGATTCGATTATGGAGACAGACGGCGAAAGGCATCGATTCATTCGCGGCTTGATCGGAACTAGCCTTGGCTATGCAGGGCTAGAGGCTCTAGTTCCAAAGCTGTGCAACCATGTTAGATTCTTCTTGGAATCTAAATGGGAGCAGGGTGGTGATGGAAACACAATTAGTCTCTACCGTTCGACGAAAATGCTAACGTTTAGCATAGTTTTCGAGTGCTTGTTGGGGATCAAGGTGGAGCAAGGGATGCTAGAGACATTTGAGAAGGTTCTAGAAGGCGTGTTTTCGCCGGCTATCGAGTTTCCGGGGACGAAGTTTTGGAGGGCGAAGAAGGCGAGGATGGAGATAGAGAAGGCTCTTAGAAAAGAAGTAAGGGAGAAGAGGAAGGAGATGGAGGAGAATTTGCATAATAATGAGAAAGATGGAATGCTTCTTTCAAGATTGGTTAATGCTATGATCAAAGGTGAGATTAGTGAGAAAGAGGTCATTGATAATGTGGTGCTGCTGGTTTTTGCAGCTCATGATACAACTTCTTTTGCCATTGCCATGACCTTCAAGATGCTTGCACAACATCCTGATTGCTATAGCAAATTGCTTCAAGAACATGCTGATATAACGAGAAACAAAAGAAGAGATGAGAGTCTCTCAATGGAGGATATAAAGAAGATGAAGTATACATGGCAAGTTGCTAGAGAAAGCATGAGATTGTTCCCTCCTATCTTTGGCTCTTTTAGGAAAGCAATCACTCATATTCAATATGAAGGATACACCATACCTAAAGGATGGAAGGTGTTATGGACAACATATGGGACACATTACAATGAAGAGTATTTTAAGGAAGCTCAAAGTTTCAAGCCAAGTAGGTTTGAAGAAGAAGAAATACCACAATATGCATATGTTCCATTTGGAGGAGGGCCAAGAATGTGTGCTGGGTACCAATTAGCAAAGATAAATATCCTAATTCTTGTTCATTATGTTGTGACCAAATATGATTGGTCCTTACTTCATCCAGAGGAACCAATCACCATGGATCCTCTTCCATTCCCATCCCTTGGAATGCCAATAAGATTTTTTCCCAAACAAAATTGA 1404 0.4217 MLIVSFNFLWRKKRSNREKKQLPPGDMKFPLIGETMEFFNAQRRNQLFEEFVRPRVLKHGKIFKTRIMGSPTVIVNGSEANKFFLTNEFKLVKSSWPSSSVQLMGTDSIMETDGERHRFIRGLIGTSLGYAGLEALVPKLCNHVRFFLESKWEQGGDGNTISLYRSTKMLTFSIVFECLLGIKVEQGMLETFEKVLEGVFSPAIEFPGTKFWRAKKARMEIEKALRKEVREKRKEMEENLHNNEKDGMLLSRLVNAMIKGEISEKEVIDNVVLLVFAAHDTTSFAIAMTFKMLAQHPDCYSKLLQEHADITRNKRRDESLSMEDIKKMKYTWQVARESMRLFPPIFGSFRKAITHIQYEGYTIPKGWKVLWTTYGTHYNEEYFKEAQSFKPSRFEEEEIPQYAYVPFGGGPRMCAGYQLAKINILILVHYVVTKYDWSLLHPEEPITMDPLPFPSLGMPIRFFPKQN 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271934g00008 467 Gene3D Cytochrome P450 11 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271934g00008 467 Pfam Cytochrome P450 23 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271934g00008 467 CDD CYP90-like 55 464 - -
Stsc271934g00008 467 PANTHER CYTOCHROME P450 26 17 450 - -
Stsc271934g00008 467 SUPERFAMILY Cytochrome P450 17 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271934g00008 467 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271934g00008 467 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271934g00008 467 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271934g00008 467 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271934g00008 467 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271934g00008 467 PRINTS E-class P450 group I signature 286 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271934g00008 467 Coils Coil 214 246 - -
Stsc271934g00008 467 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271934g00008 467 PRINTS P450 superfamily signature 277 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271934g00008 467 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271934g00008 467 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271934g00008 467 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Stsc271934g00008 467 FunFam Taxadiene 5-alpha hydroxylase 13 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271934g00008 Stsc-Chr271934 57428 59406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271934g00008 22 369 Cytochrome P450 AT2G42850 63.793 8.14e-153 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271934g00008 - - gmx:100793336 734.947