Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271931g00003 ATGGATCAAAATGGTCAGATCACAATAGCAATTGGAGTCCTTTTTGTGATGAGCACGCTTTGCTTGTTGCTTTTTCATCGCTCAAAAGCTTTTCAAAGGAGCAGAGAACCCCCTATGGTTGACGGTGCATGGCCTTTACTTGGTCATCTCCCATTGTTGAGTGGTTCCAAGGCAACCCATCATCTCTTTGGTAGCATCTCCGACAACTATGGACCCCTTTTCACCATCAAAATTGGTCACACCAAAATATTAGTGATCAACAACTCAGAAACAGCAAAGGAGTGTTACACGACAAACGATTTGGCTGTGTCATATCGTCCGAACCTCGTTGCTATTCAAAACATGACATACAACCACTCCATGTTTGGCCATGTTCGCGTCTCTGAAGTGCACACATCAATTAAGGAGTTGTACGATGTTTGGATGCGGAAGAAGGGCAATTCAGACTTTTTACAGGTGGAATTGAAGAAGTGGTTCCATGAGTTGGCTTTTAATACTGCTCTACGAATAGTTGCTGGGAAACGATATTTTGGGGAAACTGCTGTTGTTAAAGAGGACGAAGCACAGAGATGCTTGAAAGCCTTAAGGGAGTATATGAGGTTGATTGGAGTGTTCACCGTAGTGAGTGGCTACAAGCTACAAGAGCATCGGCATAACAGGGCTACAAGTATAAATGATCATGTTGATAAAGATTTCATGGATGTGATGCTTTCAATGATTGATGGAGCAACAATTCAGGGGTTTGATGCTGACACCGTCATTAAAGCAACAACAATGCCACTATGCGGGACACAATGCAAAAGATGTCATTTTTGCACTTGGAACCCAACTATGTCGTGTATGGTTCATTGGACTCCAAATGCAAAACCATCATTTCCATTAATCCCACCTGTTGCAGTCACAATGTCAGACCATCAATCTGGAATTCGCAAATTCAGAGAAGATTGCATCCTTGGTGGCTACCATGTGAGCAAGGGAACTCGACTATTAACAAATCTTTGGAAGATCCAAACAGACCCAAGCATTTGGGAAGATCCATTGGAGTTCAAGCCAGAGAGGTGGTTCCTCACTGCTCATAAGGAAGTTGATGTGAAAGGGAACCATTTTGAGTATATACCTTTTGGGAGTGGTAGAAGGATATACCCTGGAATATCATTTGAAATTCGAACAGCACATTTGACTCTAGCAAGCTTTCTTCAGTGTTTTCAACTCTCAAAAACATCAAATGAACCTATTGATATGACTTCAGTGGTTGAAATAACTAACATCAAAGTTACTCCATTGGAAGTTCTTATCAAACCTCATTTATCTTCTCTTCTTTATGAATCCATGTGA 1335 0.4142 MDQNGQITIAIGVLFVMSTLCLLLFHRSKAFQRSREPPMVDGAWPLLGHLPLLSGSKATHHLFGSISDNYGPLFTIKIGHTKILVINNSETAKECYTTNDLAVSYRPNLVAIQNMTYNHSMFGHVRVSEVHTSIKELYDVWMRKKGNSDFLQVELKKWFHELAFNTALRIVAGKRYFGETAVVKEDEAQRCLKALREYMRLIGVFTVVSGYKLQEHRHNRATSINDHVDKDFMDVMLSMIDGATIQGFDADTVIKATTMPLCGTQCKRCHFCTWNPTMSCMVHWTPNAKPSFPLIPPVAVTMSDHQSGIRKFREDCILGGYHVSKGTRLLTNLWKIQTDPSIWEDPLEFKPERWFLTAHKEVDVKGNHFEYIPFGSGRRIYPGISFEIRTAHLTLASFLQCFQLSKTSNEPIDMTSVVEITNIKVTPLEVLIKPHLSSLLYESM 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271931g00003 444 PRINTS E-class P450 group I signature 332 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271931g00003 444 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271931g00003 444 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271931g00003 444 PRINTS E-class P450 group I signature 371 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271931g00003 444 SUPERFAMILY Cytochrome P450 309 434 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271931g00003 444 PANTHER CYTOCHROME P450 82C3-RELATED 121 207 - -
Stsc271931g00003 444 SUPERFAMILY Cytochrome P450 31 244 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271931g00003 444 Gene3D Cytochrome P450 22 261 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271931g00003 444 Pfam Cytochrome P450 41 114 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271931g00003 444 Pfam Cytochrome P450 310 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271931g00003 444 Gene3D Cytochrome P450 291 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271931g00003 Stsc-Chr271931 33943 39236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271931g00003 38 441 Cytochrome P450 AT4G31970 33.400 5.41e-89 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271931g00003 - - gmx:100802193 461.84