Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271930g00015 ATGAGTATGAAAGGTTTTGATGATTATGATTCCTTTCTTGTTTTGCAGGGAATCAAGAAGAAAATGGCATCATCAAGCTCATATAATTCACCTTGTGCTGCCTGCAAATTCTTGAGGAGGAAGTGCATGCCAGGTTGTATCTTTGCGCCTTACTTTCCACCTGAAGAGCCTCAAAAGTTTGCAAACGTACACAAGATCTTTGGTGCCAGCAATGTCACCAAGCTTCTCAACGAGCTTCTGCCTCATCAGAGGGAGGATGCCGTCAACTCCCTCGCGTACGAGGCAGAAGCTCGTGTGAGAGATCCGGTTTATGGATGTGTTGGTGCCATCTCTTTCCTCCAGAGACAAGTCCAGAGGCTTCAGAAGGAGCTTGATGCCGCCAACGCGGATCTTCTCCGATATTCCTTCGCCGACATCGCTTCAACGCCGGCTCTTTCGATGCCTCCGGGGCTAACTAATGCTACTTCCATCCAACAAATTCCCCAAAGGTTTGGTGCAAGATTATTTGGTAATGAAGGAAGTGGGTTCTATAACAATAATCGCCAATATTCTCCTAATATTTATTCTTATCCTTACTCTCTTCCATGGACCGATACCTCTTCCGAGGATATCAGCAATGGAGGAGGGATAGGAGGTGGAGGCGGAGGTGAAGGCGGAGGAGGTAATTTGTGA 672 0.4702 MSMKGFDDYDSFLVLQGIKKKMASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYSFADIASTPALSMPPGLTNATSIQQIPQRFGARLFGNEGSGFYNNNRQYSPNIYSYPYSLPWTDTSSEDISNGGGIGGGGGGEGGGGNL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271930g00015 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 29 148 - -
Stsc271930g00015 223 MobiDBLite consensus disorder prediction 203 223 - -
Stsc271930g00015 223 Coils Coil 110 130 - -
Stsc271930g00015 223 ProSiteProfiles LOB domain profile. 30 131 IPR004883 -
Stsc271930g00015 223 Pfam Lateral organ boundaries (LOB) domain 31 128 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271930g00015 Stsc-Chr271930 81284 82017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271930g00015 22 141 AS2 family AT5G63090 90.083 8.98e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc271930g00015 LOB 4.5e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271930g00015 - - ahf:112722314 372.089