Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271929g00009 ATGGTCATGGATACCTTTATGACTACCACCCGGGTCTTACCCGAACCCGACATTTACTTATACACTTCTGTCTCAACACCCATTCCAGTCCATGCTAGCATCTTGGTTTCGGCATCTCCGGTTTTGGAGAACATGGTAATGTCCCACAAAATCATCAAAATCTCCGGTGTTCCTTACCGCGCCGTCATCGCATTCCTACGCTTTCTCTACTCCTTCAGGTGCACGGAGGAAGAGATGGAGAAGTACGGAATGCACCTTCTAGTGCTATCGCACGTGTACATGGTGGCGGAGCTGAAGAGAAGGTGCGTGAAGGAAGTGGGGGAGCACGTGACAGAGGAGAGCGTAGTGGACGTGCTGCAACTGTCGCGGCTCTGCGACGCACCGGATCTTTATCTCAAGTGCGTGAAGATGCTCGACGAACAGTTCAAGAAGGTGGAGAGAACGGAGGGATGGCAATTCTTGCAACACCATGACCCACAGCTTGAGCTTGATATCCTCTGCCTTCTTGATCAAAATGACAACAGAAAGAAGAGATTGATGAAGAGGAAGAAACAAGAGAAGGTGTATATGCAACTGTGCGAAGCAATGGAGTGTTTAGAACACATTTGTACGGAAGGGTGCACTAACGTGGGGCCCTACGATGTGGAACTTCGTAAAGGGAGAGAAGCATGCACCAAGTTTGGTGACACGTGTCAGGGGATGCAGGCTTTGATACAACACTTTGCCACGTGTACGATGAGGAATAGCAGAAGGTGCATGAGGTGCAAGCGCATGTGGCAGCTCTTTAGACTTCACTCCTCCATTTGCCACCACCATGATTCCTGCAAGGTCCCTCTTTGCAGACAAATTGAATTGAAGAGTCAACAAGAGAAGAGGAAAGATGATGGAAGATGGAGACTTCTTGTGAGGAAGGTGGCTTCAGCCAAAGCCATGTCATCTTTGTTTCTCTCAAACACCAACTCTGAACTCAACAAATTTTAG 981 0.4852 MVMDTFMTTTRVLPEPDIYLYTSVSTPIPVHASILVSASPVLENMVMSHKIIKISGVPYRAVIAFLRFLYSFRCTEEEMEKYGMHLLVLSHVYMVAELKRRCVKEVGEHVTEESVVDVLQLSRLCDAPDLYLKCVKMLDEQFKKVERTEGWQFLQHHDPQLELDILCLLDQNDNRKKRLMKRKKQEKVYMQLCEAMECLEHICTEGCTNVGPYDVELRKGREACTKFGDTCQGMQALIQHFATCTMRNSRRCMRCKRMWQLFRLHSSICHHHDSCKVPLCRQIELKSQQEKRKDDGRWRLLVRKVASAKAMSSLFLSNTNSELNKF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271929g00009 326 Gene3D Potassium Channel Kv1.1; Chain A 15 107 IPR011333 -
Stsc271929g00009 326 SUPERFAMILY TAZ domain 184 283 IPR035898 -
Stsc271929g00009 326 Pfam TAZ zinc finger 194 280 IPR000197 -
Stsc271929g00009 326 ProSiteProfiles BTB domain profile. 16 78 IPR000210 GO:0005515
Stsc271929g00009 326 SMART BTB_4 16 110 IPR000210 GO:0005515
Stsc271929g00009 326 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 14 319 IPR044513 -
Stsc271929g00009 326 SMART TAZ_2 186 281 IPR000197 -
Stsc271929g00009 326 Gene3D TAZ domain 184 316 IPR035898 -
Stsc271929g00009 326 FunFam BTB/POZ and TAZ domain-containing protein 2 111 181 - -
Stsc271929g00009 326 Gene3D - 109 183 - -
Stsc271929g00009 326 FunFam BTB/POZ and TAZ domain-containing protein 2 183 310 - -
Stsc271929g00009 326 SUPERFAMILY POZ domain 26 104 IPR011333 -
Stsc271929g00009 326 Pfam BTB/POZ domain 17 105 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271929g00009 Stsc-Chr271929 56219 60344 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Stsc271929g00009 BTB 8.1e-08 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271929g00009 - - qsu:112013900 414.075