Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271926g00011 ATGAATATTCGGGGTCAGACTCAGGCTCAGGCTCAGGCTCCGCCAGGGATGATGGATGGGATTGGGGTTCCTGTTGCTCCCAATCCGATAAGCAGAAAGAAGGGCACGGGGGTGAGGGCGTGGTTGCTCCTCGATTCCAGTGGTCAGAAGCAGGTCGTGGAGGCCGGCAAGCACGCCATCATGCGCCGCACCGGTCTCCCCGCCCGCGACCTCCGTATCCTGGACCCCCTCCTCTCCTACCCCTCCACTGTGCTGGGCCGTGAGAGGGCCATCGTCATCAACCTCGAGCACATCAAGGCCATCATCACCGCCAACGAGGTCCTCCTCCTCAATTCCCGTGACCCGTCCGTAACCCCTTTCGTGGAGGAGCTCCACTCGAGGATCCTTCGCCACCAGGGAGCTGCTGCGGCGGCTGCTGCTTCTGATGATTCGAAGCTAGGGAAAGTGTACGAGTCGGAAGAAGCGCAATCGAGAGAGAGAAAGGGAGAAGACGGGGATGAAGATGAAGATCCGAATCCGGATCCGGATCCGGAAGCGAAAGGGCAATCGAAGCAGAATGATATCCAGGACGGAGATGGGATGAAGATCCTCCCGTTCGAGTTTGTAGCACTGGAGGCGTGCCTTGAGGCTGCGTGCAGTGTGTTAGAGAACGAGGCAAAAACTTTGGAACAGGAGGCCCACCCTGCCTTGGACAAGCTCACTTCCAAGATCAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAGAGCCGCCTCGTTGCCATCACTGGCCGCGTTCAGAAGGTTAGGGACGAGTTAGAACACTTGCTCGATGACGACGACGATATGGCTGAGATGTACCTCACCGACAAGTTACAGCAGCTCCACAGTTCTTCTGCCTCCTCCATCAATGATGATGATGATGATGTAGACCACCACCTTGATGTCGATGACAGCATTCCTCCTGAAATATCACTGGAAGCTGGTGCAACTGCTGCTGCAAGCGATGAAGATAACCAACATGATGACAGGCTATTAGTGGGCGTTAGCAGAGAAAGCCGTGCTAGCACTACCTACAGTACTACAACTAAGCATCTTGATGTTGAGGAGCTTGAGATGCTCTTGGAAGCTTATTTTGTGCAAATTGATGGCACACTTAACAAGCTCTCTACGCTAAGGGAATATGTGGACGACACAGAGGATTACATCAACATAATGCTGGATGACAAACAGAATCATCTGCTCCAAATGGGAGTCATGTTGACCACAGCAACTCTGGTGGTGAGTGCCTTTGTCGTTGTTGCTGGTGTTTTTGGCATGAACATCCATATTGAGCTCTTTGATTCAGATTTTGCCGGGAATAGAGAGTTCTTGTGGACTGTTGGTGGCAGCACTGCTGGAACCATTTTCTTGTATGTGGTTGCCATTGCCTGGTGCAAGCACAAACGCTTGCTCGAGTAG 1440 0.5271 MNIRGQTQAQAQAPPGMMDGIGVPVAPNPISRKKGTGVRAWLLLDSSGQKQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITANEVLLLNSRDPSVTPFVEELHSRILRHQGAAAAAAASDDSKLGKVYESEEAQSRERKGEDGDEDEDPNPDPDPEAKGQSKQNDIQDGDGMKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDDDMAEMYLTDKLQQLHSSSASSINDDDDDVDHHLDVDDSIPPEISLEAGATAAASDEDNQHDDRLLVGVSRESRASTTYSTTTKHLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGVFGMNIHIELFDSDFAGNREFLWTVGGSTAGTIFLYVVAIAWCKHKRLLE 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271926g00011 479 MobiDBLite consensus disorder prediction 146 165 - -
Stsc271926g00011 479 Gene3D - 28 112 - -
Stsc271926g00011 479 MobiDBLite consensus disorder prediction 295 313 - -
Stsc271926g00011 479 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 30 478 IPR039204 -
Stsc271926g00011 479 MobiDBLite consensus disorder prediction 291 313 - -
Stsc271926g00011 479 Gene3D Magnesium transport protein CorA, transmembrane region 178 407 - -
Stsc271926g00011 479 MobiDBLite consensus disorder prediction 140 190 - -
Stsc271926g00011 479 FunFam Magnesium transporter MRS2-1 30 112 - -
Stsc271926g00011 479 Coils Coil 205 225 - -
Stsc271926g00011 479 CDD Mrs2_Mfm1p-like 41 477 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271926g00011 Stsc-Chr271926 51019 53471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271926g00011 41 479 MRS2 Gene Family AT3G19640 66.297 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271926g00011 - - ahf:112732939 724.931