Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271925g00012 ATGTTCAAATTTTTGAAAGAGGTAGTGGGTGGATCTGGGACAGGCTTGAAGGATCTGCCTTACAACATCGGCGAGGCTTACCCTTCCGCTTGGGGCTCTTGGGTTCATCACCGCGGCACCAACAAGGATGACGGGTCTCCGGTATCGATCTTCTCTCTGACTGGGAGTACCGCCCAGGATGGGCATTTAGCTGCGGGTCGGAATGGTGTCAAGAGACTCCGAACGGTTAGGCATCCCAATATCTTGTCATTTCTTCATAGTACCGAAGTCGAAACCTATGAAGGTGGTTCCCCCAAGGTTACCATCTACATTGTGACTGAGCCTGTGATGCCACTTACAGACAAGATTAGGGAGTTAGGCCTTGAAGGTACACAAAGGGATGAGTACTATGCTTGGGGTTTGCACCAAGTAGCTAAAGCTGTCAGCTTCTTAAATAACGATTGTAAACTTGTTCATGGTAATGTTTGCATGGCTAGTGTTGTTGTCACACAAACTTTGGACTGGAAACTTCATGCCTTTGATGTTCTATCAGAGTTTGATGGGAATAATGAAACTTCATCTACCTCGATGCTGCAATATGCATGGCTTGTTGGTGCACAATACAAACCAATGGAGCTGGTAAAATCGGACTGGGCTGCAATTAAGAAGTCTCCTCCATGGTCCATTGATTCTTGGGGCATGGGTTGTCTAATCTATGAGATATTCTCTGGCACAAGATTGGGAAAAACAGAGGACTTGCGCAACACTGGTTCCATTCCCAAGTCTCTACTTCCAGATTACCAGCGACTACTGAGTTCCACGCCATCTCGTAGATTAAATACTTCAAAGCTTATAGAAAACAGTGAGTACTTTCAAAACAAGTTGGTTGATACAATACATTTCATGGAAATTCTGAGTTTGAAAGATAGTGTTGAGAAAGACACCTTCTTCCGCAAGCTTCCAAATCTAGCAGAGCAGCTTCCTCGTCCAATTGTAGTGAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCCCTGCTTTGACTGCACTTTTGAAAATGGGCTCCTGGCTTTCTGCTGAGGATTTTCGTCTCAAGGTGCTGCCAACAATTGTTAAACTATATGCCTCTAATGACCGAGCTATCAGAGTTGCCCTACTTCAACATATTGATCAATATGGAGAGTCGTTATCAGCACAAATTGTTGATGAACAGGTTTACCCTCATGTTGCTACTGGGTTCTCTGATACATCTGCTTTTCTGAGGGAGCTGACTCTCAAATCTATGCTAACTCTGGCTCCAAAGCTGTCTCAAAGGACAATTTCAGGATCGTTATTAAAGTATCTGTCAAAGTTACAGGTTGACGAAGAACCAGCTATACGAACAAACACTACCATCTTGTTGGGAAATATTGCAACCTACTTAAATGACGGGACAAGAAAAAGAGTGTTGATTAATGCATTTACAGCTCGTGCTTTGCGTGATACTTTTCCACCTGCTAGAGCAGCAGGCATTATGGCTTTGTGTGCCACCAGTTCCTACTATGACATTACTGAAGTTGCAACCCGTATTCTTCCAAATGTTGTTGTCCTCACAATTGATCCTGACAGCGATGTTCGAACTAAGGCATTTCAAGCTGTTGATCAATTTTTACAGATAGCGAAGAATTATTATCAGAAGACAAATGCACCAGACGGTGCTGCAGTTGCAGGCATGGGAAGTTCGGCTGGTCCAGAAAATGCCGGTTTACTTGGATGGGCTATGAGCTCGTTGACCCTGAAGGGTAAACCTTCTGATCATCATGCTCCAGTTGCTTCAGCAACTACTGGTGCACTAACACAAACGTCTTCTAATGCCAGCTCAGCTGTAGAAACAGTAGAAACAACATCAACAGTACCTGCCCGAGTAAGCTACTCAACTGATTTCGCTGAACAGCCTGCTCCTCCGTCACCTACATCAACGGATGGTTGGGGAGAACTAGAGAACGGAATTGATGAAGAGGTTGAAAATGATAAAGACGGGTGGGGTGATCTGGAACCACTAGAAGAAGCAAAGCCAGCTCCCACCCTTGCAAACATTCAAGCAGCTCAACGGCGGCCAGTCACTCAACCTGTTGCACAGACAAAACTAGCCTCAAATTCGCGATCTAAAAGTACACCAAAGTTGAACGAAGATGATGAATTGTGGGGTTCCATAGCAGCTCCTGCTCCTAAAACATCAAAACCTCTAAATTTGAAACCAAATGCAACTGATGAAGATGACCCCTGGGCCGCTATTGCTGCTCCTGCACCCACTACTAAGGTCAAACCCTTAGCAGGAGGCCGAGGCCGGGGAGCCAAACTAGCTGCTCCAAAATTAGGTGCTCAGAGGATAAACCGAACGTCGTCATCCGGTATGTAA 2397 0.451 MFKFLKEVVGGSGTGLKDLPYNIGEAYPSAWGSWVHHRGTNKDDGSPVSIFSLTGSTAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEVETYEGGSPKVTIYIVTEPVMPLTDKIRELGLEGTQRDEYYAWGLHQVAKAVSFLNNDCKLVHGNVCMASVVVTQTLDWKLHAFDVLSEFDGNNETSSTSMLQYAWLVGAQYKPMELVKSDWAAIKKSPPWSIDSWGMGCLIYEIFSGTRLGKTEDLRNTGSIPKSLLPDYQRLLSSTPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRPIVVKKLLPLLASALEFGSAAAPALTALLKMGSWLSAEDFRLKVLPTIVKLYASNDRAIRVALLQHIDQYGESLSAQIVDEQVYPHVATGFSDTSAFLRELTLKSMLTLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIATYLNDGTRKRVLINAFTARALRDTFPPARAAGIMALCATSSYYDITEVATRILPNVVVLTIDPDSDVRTKAFQAVDQFLQIAKNYYQKTNAPDGAAVAGMGSSAGPENAGLLGWAMSSLTLKGKPSDHHAPVASATTGALTQTSSNASSAVETVETTSTVPARVSYSTDFAEQPAPPSPTSTDGWGELENGIDEEVENDKDGWGDLEPLEEAKPAPTLANIQAAQRRPVTQPVAQTKLASNSRSKSTPKLNEDDELWGSIAAPAPKTSKPLNLKPNATDEDDPWAAIAAPAPTTKVKPLAGGRGRGAKLAAPKLGAQRINRTSSSGM 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271925g00012 798 MobiDBLite consensus disorder prediction 608 656 - -
Stsc271925g00012 798 MobiDBLite consensus disorder prediction 608 659 - -
Stsc271925g00012 798 Gene3D Transferase(Phosphotransferase) domain 1 112 280 - -
Stsc271925g00012 798 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 9 772 - -
Stsc271925g00012 798 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc271925g00012 798 SMART serkin_6 37 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc271925g00012 798 SUPERFAMILY ARM repeat 293 553 IPR016024 -
Stsc271925g00012 798 Pfam Protein kinase domain 41 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc271925g00012 798 ProSiteProfiles HEAT repeat profile. 366 404 IPR021133 -
Stsc271925g00012 798 MobiDBLite consensus disorder prediction 694 717 - -
Stsc271925g00012 798 SUPERFAMILY Protein kinase-like (PK-like) 36 287 IPR011009 -
Stsc271925g00012 798 MobiDBLite consensus disorder prediction 694 798 - -
Stsc271925g00012 798 Gene3D - 282 559 IPR011989 -
Stsc271925g00012 798 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271925g00012 Stsc-Chr271925 83026 91084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271925g00012 70 291 MAP Kinase Kinase Kinase AT5G66850 25.105 1.17e-06 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Stsc271925g00012 Pkinase 8.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271925g00012 K08876 - gmx:100782748 1334.7