Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271922g00011 ATGGTGGTTCCTTCTCAGGCAAATCTGGAAGACTTTTTCAAGCCCTTCCATTTCGGAGGGTTGAACCCAGAAGAACAAGTGTTACCACCAGAACAAGAAACACCGGGGGCCCAAGTGAACGAGCCCAGGGGTAGCTATACTGGCGGGGCATACGGCGTTGGAGCGCCGCCGCCGCCGCCACAAGCTGCAGGTGCGGCAACGAAGGGTGCGGAGGCGAATAGTTATAATAAGCCTGGTGAAGGGGTCAATAAGGGTGAGGGTCTTGTGGTGGGGTTCTACGATAAGAGCTGCCCACAAGCAGAGAAGATTGTGAGGCAGTGGTTGCAGAATGTTTTGAAGTCAAATCCATATGCAACTGCTAACATTATCCGTCTTGCATTCCATGACTGTGCTGTTGGTGGTTGTGATGCGTCGATCCTGCTAGACTCCGTTGCGCAAGGGGACAAAGTAGAGAAGGGTTCAATCTTCAACGGAGTCAGCCTCAAAGGTGCCGATCTCCTCGACGATCTTAAAATGAGATTGGAGGAAGAATGTCCCCAGACTGTCTCTTGCGCTGACGCAATTGCCTTCTCTGCCAATGAAGCTGTGGCAATGTCCAGCGGAGTCCGCCAGCGTCCTCTCGGAGGCCGCAGGGACTCCCTCAACTCCCTGGCTACCGCGGCAGACCAGAACCTTGCCTCGCCAACTGCCACGGTAGACCAGATGTCTGAGATCTTCAGGAAGCTTGGCTTCAATGCTGATGAAATGGTGGTCCTCTTGGGTGCACACTCCATTGGTTCGGCGCACTGTGATCTTTTCATGGACAGGGTTTACAACTTCAGGAACACTCAGAAGCCCGATCCGGTTCTTCCATTGCCCTATGTGGATCAATTGAAGGGGATTTGCACTGATCCTGGAACACCGCAATTCAGGAACCCTCCTGCGAACTTTGATGAGACACCTTATGCGTTGGACAACCTCTACTTTAGGAACCTCGTACAGAACAAGTCCTTGCTGCTGTCGGATTCTTCGTTGCTTGGTGATGCTAGGACGGGGCCCACCGTGAGACAGATGGCGGATGATGATATGTTGTTCAGAAAGAGGTTTGCTGAGTTGTTCAGTAGGTTGACTTCTTTTAATGTTCTCACTGGGAGGAATAATGGAGAAGTTAGGAGGACTTGTAGGTCTACTAATTGA 1176 0.517 MVVPSQANLEDFFKPFHFGGLNPEEQVLPPEQETPGAQVNEPRGSYTGGAYGVGAPPPPPQAAGAATKGAEANSYNKPGEGVNKGEGLVVGFYDKSCPQAEKIVRQWLQNVLKSNPYATANIIRLAFHDCAVGGCDASILLDSVAQGDKVEKGSIFNGVSLKGADLLDDLKMRLEEECPQTVSCADAIAFSANEAVAMSSGVRQRPLGGRRDSLNSLATAADQNLASPTATVDQMSEIFRKLGFNADEMVVLLGAHSIGSAHCDLFMDRVYNFRNTQKPDPVLPLPYVDQLKGICTDPGTPQFRNPPANFDETPYALDNLYFRNLVQNKSLLLSDSSLLGDARTGPTVRQMADDDMLFRKRFAELFSRLTSFNVLTGRNNGEVRRTCRSTN 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271922g00011 391 ProSitePatterns Peroxidases proximal heme-ligand signature. 248 258 IPR019793 -
Stsc271922g00011 391 SUPERFAMILY Heme-dependent peroxidases 88 391 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 Pfam Peroxidase 104 354 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 Gene3D Peroxidase, domain 2 226 369 - -
Stsc271922g00011 391 ProSitePatterns Peroxidases active site signature. 119 130 IPR019794 GO:0004601
Stsc271922g00011 391 FunFam Peroxidase 226 369 - -
Stsc271922g00011 391 PANTHER - 88 391 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 PRINTS Haem peroxidase superfamily signature 119 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 PRINTS Haem peroxidase superfamily signature 182 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 PRINTS Haem peroxidase superfamily signature 310 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 PRINTS Plant peroxidase signature 364 377 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 PRINTS Plant peroxidase signature 121 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 PRINTS Plant peroxidase signature 247 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 PRINTS Plant peroxidase signature 97 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 PRINTS Plant peroxidase signature 308 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 PRINTS Plant peroxidase signature 324 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 PRINTS Plant peroxidase signature 181 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 PRINTS Plant peroxidase signature 162 175 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 PRINTS Plant peroxidase signature 200 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 Gene3D - 91 391 - -
Stsc271922g00011 391 ProSiteProfiles Plant heme peroxidase family profile. 87 391 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc271922g00011 391 MobiDBLite consensus disorder prediction 20 71 - -
Stsc271922g00011 391 CDD secretory_peroxidase 87 390 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271922g00011 Stsc-Chr271922 78097 80636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271922g00011 91 391 Peroxidase AT4G08770 40.850 1.17e-69 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271922g00011 K00430 - gmx:100783807 349.747