Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271920g00024 ATGGAAAATCAGAGGGTTTTCACACGCTCACAGATTCTCCAACACAAATCCGAGAAAGATTGTTGGCTTGTCATCAATGGCAGAGTTTTGGATGTCACAAAGTTCCTGGAGGAACACCCCGGCGGCAAAGAGGTTTTGATGGAGGTTGCAGGCAAGGATGCAACGAAGGAGTTCGATGCAATTGGACACAGCAAAGGAGCACAAAACTCGGTCCTTAAGTACCAGGTGGGTGTCCTAGAAGGTGCCACTGTAGAAGAGGTAGGAGGCATGGAGACTGTTACAGGCATGGAGTCCAAGACCCAAGAGATGAGTGCATTCGTTGTAAAAGAGGATCCTAAGGCTCCATCTCAAATATTTTACGAGTTCTTTCTTCCACTTCTTGTTGCAACATCCTATTTTGGCTACCGATTCCTTACCAGAGAAGAATCACACATTTAG 438 0.4612 MENQRVFTRSQILQHKSEKDCWLVINGRVLDVTKFLEEHPGGKEVLMEVAGKDATKEFDAIGHSKGAQNSVLKYQVGVLEGATVEEVGGMETVTGMESKTQEMSAFVVKEDPKAPSQIFYEFFLPLLVATSYFGYRFLTREESHI 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271920g00024 145 SMART Cyt_b5_2 7 80 IPR001199 -
Stsc271920g00024 145 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Stsc271920g00024 145 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Stsc271920g00024 145 PANTHER CYTOCHROME B5 3 138 - -
Stsc271920g00024 145 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 84 IPR036400 -
Stsc271920g00024 145 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037
Stsc271920g00024 145 FunFam Cytochrome b5 type B 1 84 - -
Stsc271920g00024 145 Gene3D - 1 85 IPR036400 -
Stsc271920g00024 145 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Stsc271920g00024 145 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Stsc271920g00024 145 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Stsc271920g00024 145 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271920g00024 Stsc-Chr271920 130997 131796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271920g00024 3 143 NADPH P450 reductases AT5G48810 40.559 3.85e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271920g00024 - - gmx:113001935 205.297