Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc271920g00021 | ATGAATTCTCTGATTTTGAAATGTGTTCTGCTGATGGTTCTATTCTGCGGACATAGCACCGCAGAAACCAAAACACAGCACTCCAAAAAGAACACATACATAATTCACATGGACAAGTTCAACATGCCATCAAGTTTCAATGACCATCTTCAGTGGTATGATTCATCTCTCAAAGCAGTTTCAGAATCTGCAGAGATGCTCTACACCTACAAACATGTAGCTCATGGCTTCTCCACAAAGCTAACTGCTCAAGAAGCAGAACTACTCGCCAACCAACCAGGAATCCTCTCTGTTATCCCTGAAGTTCAATACGAGCTTCACACGACTCGAACACCGGAGTTCTTGGGGTTGGCAGCAAAAACAACTACTCATGCAATTTCCTCTGACAAACAAAGCGATGTGATTGTTGGAGTGCTTGACACCGGAGTATGGCCTGAACTTAAAAGCTTCGATGACACGGGGCTTGGTCCGGTACCAAGCAGTTGGAAAGGCACCTGTGAGACAGGTAACAACTTCAACTCATCAAATTGTAACAAGAAACTCATTGGTGCAAGGTTCTTTGCCAAAGGATATGAAGCAGCCTTTGGACCCATCGACTTGAAGACAGAATCAAAGTCACCCAGGGACGATGATGGCCATGGAAGTCACACTTCAACTACAGCAGCAGGATCTGCTGTTGCAGGAGCTAACCTCTTTGGTTATGCTTCAGGGACAGCAAGAGGAATGGCCCCACAAGCACGCTTGGCCGTTTACAAAGTGTGTTGGGATGGAGGGTGTTTCACTTCAGATATCGCTGCTGGAATCGACAGGGCCATTGAAGATGGTGTTCATGTGCTTTCCATGTCTATTGGGGGAGCTGTAACTGACTACTCCAGAGATATTATTGCAATTGGAACATTTGCAGCGACAGCACATGGAATTCTGGTTTCCAATTCTGCAGGAAACAGTGGGCCTAGTGCAGCATCCGTGTCTAACGTGGCTCCATGGATAACCACCGTTGGTGCTGGAACTATAGACCGGGATTTCCCTGCTTTTATCACCCTTGGAAACGGAAAGAAATACACTGGCGTGTCTCTTTACAATGGAAAGCTACCATCTGATTCTGCAGTGCCACTTGTCAATGCAGCCAATGTAAGTAGTTTATCCAGTGGACGTCTTTGCACAAAGGATAGTTTGATTAGCAGTAAAGTTTCGGGCAAAATCGTGGTGTGCGAGCGCGGAGGAAATCCGAGAGTGGAAAAGGGATTGGTTGTGAAGAAGGCTGGAGGAATTGGAATGATTCTAGCAAACACTGAAGAATACGGGGAAGAGCTAGTTGCAGATTCTTTCCTCCTGCCTGCAGCAGCATTAGGCCAGAAAGAGAGCAACGAAGTAAAGAAGTATGCAGCCTCAACTCCCAATCCAACTATCAAAATCAAATTCGGAGGCACGCATTTGGGGGTTCAGCCATCCCCAGTGGTGGCAGCATTCAGCTCCAGAGGACCAAATTTGCTGACTCCAAAAATACTTAAACCGGATTTGGTAGCTCCTGGAGTTAACATCCTAGCTGGGTGGACAGGAGCAGTAGGACCAACCGGTTTGTCCGTTGACAAAAGGCAAGTGAGCTTCAATATCATTTCCGGCACTTCCATGTCCTGCCCCCATGTTAGTGGCCTAGCTGCCCTTCTTAAGGGAGCTCACCCTGATTGGA | 1690 | 0.4698 | MNSLILKCVLLMVLFCGHSTAETKTQHSKKNTYIIHMDKFNMPSSFNDHLQWYDSSLKAVSESAEMLYTYKHVAHGFSTKLTAQEAELLANQPGILSVIPEVQYELHTTRTPEFLGLAAKTTTHAISSDKQSDVIVGVLDTGVWPELKSFDDTGLGPVPSSWKGTCETGNNFNSSNCNKKLIGARFFAKGYEAAFGPIDLKTESKSPRDDDGHGSHTSTTAAGSAVAGANLFGYASGTARGMAPQARLAVYKVCWDGGCFTSDIAAGIDRAIEDGVHVLSMSIGGAVTDYSRDIIAIGTFAATAHGILVSNSAGNSGPSAASVSNVAPWITTVGAGTIDRDFPAFITLGNGKKYTGVSLYNGKLPSDSAVPLVNAANVSSLSSGRLCTKDSLISSKVSGKIVVCERGGNPRVEKGLVVKKAGGIGMILANTEEYGEELVADSFLLPAAALGQKESNEVKKYAASTPNPTIKIKFGGTHLGVQPSPVVAAFSSRGPNLLTPKILKPDLVAPGVNILAGWTGAVGPTGLSVDKRQVSFNIISGTSMSCPHVSGLAALLKGAHPDW | 563 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc271920g00021 | 563 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 541 | 551 | IPR023828 | - | |
| Stsc271920g00021 | 563 | MobiDBLite | consensus disorder prediction | 200 | 220 | - | - | |
| Stsc271920g00021 | 563 | Pfam | Subtilase family | 132 | 563 | IPR000209 | GO:0006508|GO:0008236 | |
| Stsc271920g00021 | 563 | Pfam | Peptidase inhibitor I9 | 32 | 107 | IPR010259 | - | |
| Stsc271920g00021 | 563 | CDD | Peptidases_S8_3 | 104 | 563 | IPR034197 | - | |
| Stsc271920g00021 | 563 | CDD | PA_subtilisin_like | 346 | 472 | - | - | |
| Stsc271920g00021 | 563 | FunFam | subtilisin-like protease SBT1.5 | 339 | 479 | - | - | |
| Stsc271920g00021 | 563 | FunFam | Subtilisin-like protease SBT1.5 | 133 | 349 | - | - | |
| Stsc271920g00021 | 563 | PRINTS | Subtilisin serine protease family (S8) signature | 131 | 150 | IPR015500 | - | |
| Stsc271920g00021 | 563 | PRINTS | Subtilisin serine protease family (S8) signature | 209 | 222 | IPR015500 | - | |
| Stsc271920g00021 | 563 | PRINTS | Subtilisin serine protease family (S8) signature | 540 | 556 | IPR015500 | - | |
| Stsc271920g00021 | 563 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 103 | 563 | - | - | |
| Stsc271920g00021 | 563 | FunFam | Subtilisin-like protease SBT1.9 | 21 | 107 | - | - | |
| Stsc271920g00021 | 563 | SUPERFAMILY | PA domain | 394 | 432 | IPR046450 | - | |
| Stsc271920g00021 | 563 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 16 | 107 | IPR037045 | - | |
| Stsc271920g00021 | 563 | SUPERFAMILY | Subtilisin-like | 106 | 562 | IPR036852 | GO:0004252|GO:0006508 | |
| Stsc271920g00021 | 563 | Gene3D | - | 339 | 479 | - | - | |
| Stsc271920g00021 | 563 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 33 | 563 | IPR045051 | - | |
| Stsc271920g00021 | 563 | Pfam | PA domain | 387 | 455 | IPR003137 | - | |
| Stsc271920g00021 | 563 | Gene3D | Peptidase S8/S53 domain | 133 | 563 | IPR036852 | GO:0004252|GO:0006508 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Stsc271920g00021 | Stsc-Chr271920 | 122458 | 124208 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Stsc271920g00021 | 1 | 563 | Subtilisin-like Serine Gene Family | AT5G67360 | 63.766 | 0.0 | 746 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stsc271920g00021 | - | - | gmx:100794284 | 873.233 |