Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271920g00018 ATGAGCTGCAACGGTTGCCGGGTGCTCCGCAAGGGATGCAGCGACATGTGCCCTCTGAGGACATGCCTCCACTGGATTCCATCCCCTGAGGCACAAGCTCACGCCACTCTCTTCCTCGCTAAGTTCTTTGGCCGCTCCGATCTCTTTTCTTTCATTTCCTCCGTTCCACACAATGACAGGCCTGCGCTGTTTCAGTCTCTGCTTTATGAAGCTTGCGGACGAACCATCAATCCCGTCAATGGTGCTGTAGGACTGCTATCCACCGGTAACTGGCAACGCTGCGAGGATGCTCTCCGCACTGTCCTTGACGGCGGCGTCCTCACTCCGTTGCCGGTCTTGGATGACTCTTCTGGTTCCCATGAAATGGCACCTGCAGAGGCGTCAAAGAGGCGCAGAGTTAGCGGTGAACAATCCGAGAAAAGCTTGATGAGGTTTGATGGCATTTGCAGCAACAACCAGAGAAAGCTCTTGAATCTCTTCGTCTGA 486 0.5432 MSCNGCRVLRKGCSDMCPLRTCLHWIPSPEAQAHATLFLAKFFGRSDLFSFISSVPHNDRPALFQSLLYEACGRTINPVNGAVGLLSTGNWQRCEDALRTVLDGGVLTPLPVLDDSSGSHEMAPAEASKRRRVSGEQSEKSLMRFDGICSNNQRKLLNLFV 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271920g00018 161 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Stsc271920g00018 161 MobiDBLite consensus disorder prediction 124 138 - -
Stsc271920g00018 161 MobiDBLite consensus disorder prediction 113 138 - -
Stsc271920g00018 161 Pfam Lateral organ boundaries (LOB) domain 2 95 IPR004883 -
Stsc271920g00018 161 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271920g00018 Stsc-Chr271920 111766 112478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271920g00018 1 118 AS2 family AT3G49940 70.339 4.58e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc271920g00018 LOB 3.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271920g00018 - - adu:107461241 263.848