Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271920g00016 ATGCAATCAAGTGTGGGTGTGTGTTCCTCCTCTTCCTCTAATTGGTTGTTTCGGTTTTCAGCCGCAGCAGCCTCTCTTCTTCCCTCTTCTCTTACCTTCCCAATTTCAAAGTCTTCTTCTTCTTCTTCACTCATCACACTCTCCACTCCATCACTGATTCCTTCTCCTCTTCGCTCCACTGCGAGTGCGAGTGATTCTTCTCACGTTACCGTAATGGCTTCCAACGATGCTCAAGATCCACGATTACCTAGAATCTCCTCTGCGATCCGTGTTATCCCTGACTTCCCTAAGCCTGGTATTATGTTTCAGGACATAACCACGCTTCTGCTCGATACTAAGGCTTTCAAGGATACCATTGACTTGTTCGTTGAGAGGTACAGAGATCAGAACATTTCTGTTGTTGCAGGTGTTGAAGCAAGAGGGTTTATATTTGGCCCACCAATTGCATTAGCTATTGGTGCAAAATTTGTCCCCATGAGGAAACCCAACAAGTTGCCAGGGGAGGTAATTTCAGAAGAGTATTCTCTTGAGTATGGAACTGACAAAATGGAGATGCATGTAGGAGCTGTACAAGCTGGAGATCGAGCCTTAGTCATAGATGATCTTATTGCCACTGGGGGAACCTTATGTGCTGCAATTAAACTACTAGAACGTGTTGGGGCAGAAGTTGTTGAGTGTGCTTGTGTGATTGAGTTGCCGGAGTTAAAGGGGCGGGAAAAGCTTACTGGCAAGCCACTGTTTGTCCTAGTTAAAGGAGCCTGA 762 0.458 MQSSVGVCSSSSSNWLFRFSAAAASLLPSSLTFPISKSSSSSSLITLSTPSLIPSPLRSTASASDSSHVTVMASNDAQDPRLPRISSAIRVIPDFPKPGIMFQDITTLLLDTKAFKDTIDLFVERYRDQNISVVAGVEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGTDKMEMHVGAVQAGDRALVIDDLIATGGTLCAAIKLLERVGAEVVECACVIELPELKGREKLTGKPLFVLVKGA 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271920g00016 253 CDD PRTases_typeI 119 251 IPR000836 -
Stsc271920g00016 253 Pfam Phosphoribosyl transferase domain 111 235 IPR000836 -
Stsc271920g00016 253 Hamap Adenine phosphoribosyltransferase [apt]. 85 252 IPR005764 GO:0003999|GO:0005737|GO:0006168
Stsc271920g00016 253 Gene3D - 71 252 IPR029057 -
Stsc271920g00016 253 SUPERFAMILY PRTase-like 88 245 IPR029057 -
Stsc271920g00016 253 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 75 251 - -
Stsc271920g00016 253 FunFam Adenine phosphoribosyltransferase 1 73 252 - -
Stsc271920g00016 253 NCBIfam adenine phosphoribosyltransferase 86 250 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271920g00016 Stsc-Chr271920 89862 92662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271920g00016 72 253 PRT Gene Family AT1G27450 81.319 3.25e-109 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271920g00016 K00759 - qsu:112027152 335.495