Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271919g00030 ATGGCTCCAGAGTATGGATACTCCCTACATGCAACAGAAAAGAGTGATGTCTACAGCATGGGAATTGTGCTTATGGAGCTAGTTAGTGGTAAAACACCAACAGATGAAACTTTTGGAGCAGATATGGATATGGTGAGGTGGGTGGAGATGCACCTGGATATGCATGACGCTGCACGCGAGGAAGTGATAGATCCTGAGCTGAAACCTCTGTTGCCTGCTGAAGAGTTTGCTGCATTCCAAGTTCTTGAGGTAGCATTGCAGTGCACCAAAACTACACCACAGGAGAGGCCATCTTCCCGGAAAGTATGTGATCTTCTCCTCCATGTATTCAACAACAGAAGAGCCCAGTTTGATAAGATGAATTTGGATCAGTACAAATTCAAGTGA 387 0.4522 MAPEYGYSLHATEKSDVYSMGIVLMELVSGKTPTDETFGADMDMVRWVEMHLDMHDAAREEVIDPELKPLLPAEEFAAFQVLEVALQCTKTTPQERPSSRKVCDLLLHVFNNRRAQFDKMNLDQYKFK 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271919g00030 128 SUPERFAMILY Protein kinase-like (PK-like) 1 114 IPR011009 -
Stsc271919g00030 128 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 107 - -
Stsc271919g00030 128 ProSiteProfiles Protein kinase domain profile. 1 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc271919g00030 128 Gene3D Transferase(Phosphotransferase) domain 1 1 122 - -
Stsc271919g00030 128 Pfam Protein tyrosine and serine/threonine kinase 1 104 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271919g00030 Stsc-Chr271919 151783 152459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271919g00030 1 109 Receptor kinase-like Gene Family AT4G28490 48.624 1.60e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Stsc271919g00030 PK_Tyr_Ser-Thr 5.4e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271919g00030 - - aip:107632121 249.98