Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271919g00028 ATGATGAATTCAGCAGCAGCAGCATACTCATCAGTTGGAACATGTACATGGCTGCCGGTGCATCTTCAAAAGAGAACACCACGTGTTGCATTCTCCTCCACACATCAGAGAACGATAGCAACATCATGTTCATATAAGCAACACCTGGAGAGCGAGAGCATCCAGTTATTGAAGAGAAGAGAAGCAATAGGCATTGGCCTTGGCCTTCTCCATTCGTTCTTTTTGCAGCCACACCCGTCATCAGCCGCTGAATCAGAATCACCACCGTGTGAATTAACAGTAGCTCCTTCTGGACTTGCTTTCTGTGACAAACTTGTTGGAAGCGGCCCTCAGGCTGTTAAAGGCCAGCTTATTAAGGCACACTATGTTGGGAAATTGGAGAATGGCAAAGTTTTCGACAGCAGCTACAGTCGTGGCAAGCCACTTACATTCCGCGTCGGTGTGGGAGAGGTCATCAAAGGATGGGATGAAGGCATTTTAGGAGGTGATGGAATTCCTCCAATGCTTCAAGGTGGGAAACGTACGTTGAAGCTTCCACCACAACTCGGATACGGTTCGAGAGGAGCGGGTTGTAGAGGAGGTTCATGTGTCATTCCACCTGATTCAGTACTCTTGTTTGATGTGGAATTTGTTAGCAAAGCATGA 645 0.4744 MMNSAAAAYSSVGTCTWLPVHLQKRTPRVAFSSTHQRTIATSCSYKQHLESESIQLLKRREAIGIGLGLLHSFFLQPHPSSAAESESPPCELTVAPSGLAFCDKLVGSGPQAVKGQLIKAHYVGKLENGKVFDSSYSRGKPLTFRVGVGEVIKGWDEGILGGDGIPPMLQGGKRTLKLPPQLGYGSRGAGCRGGSCVIPPDSVLLFDVEFVSKA 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271919g00028 214 Gene3D - 87 214 IPR046357 GO:0003755
Stsc271919g00028 214 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 115 214 IPR001179 GO:0003755
Stsc271919g00028 214 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 110 210 IPR001179 GO:0003755
Stsc271919g00028 214 SUPERFAMILY FKBP-like 92 212 - -
Stsc271919g00028 214 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 32 213 IPR044183 GO:0009507
Stsc271919g00028 214 FunFam Peptidylprolyl isomerase 87 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271919g00028 Stsc-Chr271919 138887 141034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271919g00028 115 212 Calmodulin-binding Proteins AT5G48570 40.816 1.95e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271919g00028 K01802 - pvy:116141309 254.603