Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271919g00025 ATGGACATTATCACCATGCTGCTTTACTCACTTCTCTACCTAACCATATTCTTCATTTTCAGCCTTCTTATTCAATCTAGAAAGTTCAAGAACCTTCCACCGGGGCCACCCGCTCTTCCCATAATAGGAAACCTCCACCACCTCAAGAAACCCCTCCACCGCCACTTCCGAGGCCTCTCCCAAAAATACGGCGACGTCTTCTCCCTCTGGTTCGGATCCCGCCTCGTCGTCGTCGTTTCCTCCCCAACCGTCGTACAAGAGTGCTTCACCAAAAACGACGTCGTTTTAGCCAACCGCCCTCGCTTCCTCTCCGGTAAATACATCTTCTACAACTACACCACCGTAGGATCCAGCGAATACGGCGAGCACTGGCGCAACCTCCGCCGCATCACCTCCCTGGACGTCCTCTCCAACCACCGCCTCAACTCCTTCTCCCCGATCCGAAAGGACGAAACCACCAGGCTCATCCGGAAACTCTCGGAGGACTCCACGAAGGAGTTCGCCCGAGTAGAACTCTCTTCCAAGTTCTACGACATGACGTTCAACAACATCATGAGGATGATCTCCGGGAAGAGGTACTACGGCGAGGACTGCGACATGGCGGATGTGGAGGAGGCGAAGCAGTTCAGGCAGATTATTTCGGAGGTTCTTCAACTGTCCGGTGCTAACAACAAAACCGATTTTATTCCTCTTCTTGGAATGCTTGACATTGAGAACTTGAAGAAGCGGCTGGTGACCATTAGTGGTAGGACTGACAAGTTCTTGAACGGTCTTCTTCAGGAGCATCGTACGAAGAAGCAGCACCAGAACACCATGATCGACCATCTTCTCAGCCTCCAGGACTCCCAGCCCGAATACTATACCGATCAAATCATCAAGGGCCTTGGCTTGGCGATGCTTCTTGCTGGAACGGACTCGTCAGCTGTGACTCTTGAGTGGAGTGTGTGCAACTTGTTGAACCATCCAGAAGCCTTGGAGAAAGTGAGAGAAGAATTGGACACTCACGTTGGTCAAGATCGGATCGTAGAAGAATCAGACATTCCAAAACTCAACTACCTCAGAAACGTTATCAACGAGACGCTTCGTTTGTACACGCCTGCACCCTTGCTGCTACCCCACTCCTCCGCCGATGAATGCACCATAGGAGGCTACAAGGTCCCGAAGGACACCATAGTCCTAATCAACGGTTGGGCCATGCACCGGGACCCGAGGTATTGGGACGACGCAACGAGCTTCAAGCCGGAGAGGTTCGAGAGGAAAGGGGAGTTGGAGAAGATGATTGCGTTTGGGTTGGGGAGAAGGGCGTGCCCCGGTGAAGCCTTGGCTCTTAGGGCAATAAGCTTGACCATTGCGCTTTTGGTTCAGTGCTTTGACTGGAAGCGTGTTGGTGAGGACGAAATTGATATGGCTGAGACAGATGGATTCACTTTAACCAAGAAGGTTCCATTGGTAGCTATGTGTAAAACACGACCAGTTATTCACCAGCTTCTTAAGTCCTAA 1500 0.5147 MDIITMLLYSLLYLTIFFIFSLLIQSRKFKNLPPGPPALPIIGNLHHLKKPLHRHFRGLSQKYGDVFSLWFGSRLVVVVSSPTVVQECFTKNDVVLANRPRFLSGKYIFYNYTTVGSSEYGEHWRNLRRITSLDVLSNHRLNSFSPIRKDETTRLIRKLSEDSTKEFARVELSSKFYDMTFNNIMRMISGKRYYGEDCDMADVEEAKQFRQIISEVLQLSGANNKTDFIPLLGMLDIENLKKRLVTISGRTDKFLNGLLQEHRTKKQHQNTMIDHLLSLQDSQPEYYTDQIIKGLGLAMLLAGTDSSAVTLEWSVCNLLNHPEALEKVREELDTHVGQDRIVEESDIPKLNYLRNVINETLRLYTPAPLLLPHSSADECTIGGYKVPKDTIVLINGWAMHRDPRYWDDATSFKPERFERKGELEKMIAFGLGRRACPGEALALRAISLTIALLVQCFDWKRVGEDEIDMAETDGFTLTKKVPLVAMCKTRPVIHQLLKS 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271919g00025 499 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00025 499 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00025 499 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00025 499 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00025 499 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00025 499 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00025 499 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00025 499 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00025 499 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00025 499 SUPERFAMILY Cytochrome P450 33 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00025 499 FunFam Cytochrome P450 family protein 23 493 - -
Stsc271919g00025 499 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00025 499 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00025 499 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00025 499 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00025 499 CDD CYP81 64 483 - -
Stsc271919g00025 499 Pfam Cytochrome P450 33 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00025 499 PANTHER CYTOCHROME P450 82C3-RELATED 14 490 - -
Stsc271919g00025 499 Gene3D Cytochrome P450 21 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00025 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271919g00025 Stsc-Chr271919 122558 124425 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271919g00025 7 497 Cytochrome P450 AT4G37370 51.822 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271919g00025 K13260 - ag:BAA22422 806.594